RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 SPANXA2-OT1Q8N9U9 137 aa3.22□□□□□ -1.89
NIF3L1-208ENST00000436412 ATOX1O00244 68 aa3.18□□□□□ -1.9
NIF3L1-208ENST00000436412 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
NIF3L1-208ENST00000436412 A0A1W2PPM0 123 aa3.17□□□□□ -1.9
NIF3L1-208ENST00000436412 KRTAP19-3Q7Z4W3 81 aa3.17□□□□□ -1.9
NIF3L1-208ENST00000436412 BRK1Q8WUW1 75 aa3.17□□□□□ -1.9
NIF3L1-208ENST00000436412 SPCS1Q9Y6A9 102 aa3.16□□□□□ -1.9
NIF3L1-208ENST00000436412 UQCRQO14949 82 aa3.14□□□□□ -1.91
NIF3L1-208ENST00000436412 MT4P47944 62 aa3.14□□□□□ -1.91
NIF3L1-208ENST00000436412 H0Y9P7 68 aa3.13□□□□□ -1.91
NIF3L1-208ENST00000436412 MT1EP04732 61 aa3.13□□□□□ -1.91
NIF3L1-208ENST00000436412 KRTAP19-7Q3SYF9 63 aa3.13□□□□□ -1.91
NIF3L1-208ENST00000436412 CYSTM1Q9H1C7 97 aa3.13□□□□□ -1.91
NIF3L1-208ENST00000436412 MT-ATP8P03928 68 aa3.11□□□□□ -1.91
NIF3L1-208ENST00000436412 KRTAP5-7Q6L8G8 165 aa3.11□□□□□ -1.91
NIF3L1-208ENST00000436412 H3BPC8 53 aa3.1□□□□□ -1.91
NIF3L1-208ENST00000436412 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
NIF3L1-208ENST00000436412 MT1GP13640 62 aa3.09□□□□□ -1.91
NIF3L1-208ENST00000436412 GTF2H5Q6ZYL4 71 aa3.09□□□□□ -1.91
NIF3L1-208ENST00000436412 PP632Q6XCG6 107 aa3.07□□□□□ -1.92
NIF3L1-208ENST00000436412 TRAV7A0A075B6U4 112 aa3.06□□□□□ -1.92
NIF3L1-208ENST00000436412 TMEM258P61165 79 aa3.06□□□□□ -1.92
NIF3L1-208ENST00000436412 LINC00208Q96KT6 92 aa3.05□□□□□ -1.92
NIF3L1-208ENST00000436412 A0A1B0GU33 70 aa3.03□□□□□ -1.92
NIF3L1-208ENST00000436412 COL5A1-AS1Q5SY13 56 aa3.02□□□□□ -1.93
NIF3L1-208ENST00000436412 DMAC1Q96GE9 116 aa3.02□□□□□ -1.93
NIF3L1-208ENST00000436412 SPINT4Q6UDR6 99 aa3.01□□□□□ -1.93
NIF3L1-208ENST00000436412 CCDC179H3BU77 68 aa3□□□□□ -1.93
NIF3L1-208ENST00000436412 ATP5EP2Q5VTU8 51 aa3□□□□□ -1.93
NIF3L1-208ENST00000436412 MT1MQ8N339 61 aa2.99□□□□□ -1.93
NIF3L1-208ENST00000436412 KRTAP19-5Q3LI72 72 aa2.97□□□□□ -1.93
NIF3L1-208ENST00000436412 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.94
NIF3L1-208ENST00000436412 SERP1Q9Y6X1 66 aa2.96□□□□□ -1.94
NIF3L1-208ENST00000436412 ETDBQ3ZM63 59 aa2.95□□□□□ -1.94
NIF3L1-208ENST00000436412 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
NIF3L1-208ENST00000436412 A0A0D9SG42 100 aa2.94□□□□□ -1.94
NIF3L1-208ENST00000436412 F8W1H4 67 aa2.94□□□□□ -1.94
NIF3L1-208ENST00000436412 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
NIF3L1-208ENST00000436412 MT1LQ93083 61 aa2.94□□□□□ -1.94
NIF3L1-208ENST00000436412 ROMO1P60602 79 aa2.92□□□□□ -1.94
NIF3L1-208ENST00000436412 ACYP2P14621 99 aa2.9□□□□□ -1.95
NIF3L1-208ENST00000436412 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
NIF3L1-208ENST00000436412 KRTAP13-4Q3LI77 160 aa2.87□□□□□ -1.95
NIF3L1-208ENST00000436412 LINC00643Q86TS7 51 aa2.85□□□□□ -1.95
NIF3L1-208ENST00000436412 ATP5EP56381 51 aaPredicted RBP2.84□□□□□ -1.95
NIF3L1-208ENST00000436412 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.96
NIF3L1-208ENST00000436412 CHKB-CPT1BH3BT56 60 aa2.83□□□□□ -1.96
NIF3L1-208ENST00000436412 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
NIF3L1-208ENST00000436412 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
NIF3L1-208ENST00000436412 COX7CP15954 63 aa2.78□□□□□ -1.96
NIF3L1-208ENST00000436412 C10orf95Q9H7T3 257 aa2.78□□□□□ -1.96
NIF3L1-208ENST00000436412 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
NIF3L1-208ENST00000436412 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
NIF3L1-208ENST00000436412 MIR22HGQ0VDD5 57 aa2.77□□□□□ -1.97
NIF3L1-208ENST00000436412 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
NIF3L1-208ENST00000436412 Q1T7F1 81 aa2.73□□□□□ -1.97
NIF3L1-208ENST00000436412 TNP1P09430 55 aa2.69□□□□□ -1.98
NIF3L1-208ENST00000436412 KRTAP12-1P59990 96 aa2.69□□□□□ -1.98
NIF3L1-208ENST00000436412 SPATA8Q6RVD6 105 aa2.68□□□□□ -1.98
NIF3L1-208ENST00000436412 KRTAP12-3P60328 96 aa2.66□□□□□ -1.98
NIF3L1-208ENST00000436412 CDC42SE1Q9NRR8 79 aa2.64□□□□□ -1.99
NIF3L1-208ENST00000436412 SERP2Q8N6R1 65 aa2.61□□□□□ -1.99
NIF3L1-208ENST00000436412 SNURFQ9Y675 71 aa2.57□□□□□ -2
NIF3L1-208ENST00000436412 COA5Q86WW8 74 aa2.55□□□□□ -2
NIF3L1-208ENST00000436412 INE1O15225 51 aa2.51□□□□□ -2.01
NIF3L1-208ENST00000436412 MT1AP04731 61 aa2.5□□□□□ -2.01
NIF3L1-208ENST00000436412 H7BZZ5 65 aa2.49□□□□□ -2.01
NIF3L1-208ENST00000436412 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
NIF3L1-208ENST00000436412 A0A1B0GU69 56 aa2.44□□□□□ -2.02
NIF3L1-208ENST00000436412 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
NIF3L1-208ENST00000436412 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
NIF3L1-208ENST00000436412 UQCR11O14957 56 aa2.35□□□□□ -2.03
NIF3L1-208ENST00000436412 LINC01558Q9Y6Z2 57 aa2.34□□□□□ -2.03
NIF3L1-208ENST00000436412 PRR15LQ9BU68 103 aa2.32□□□□□ -2.04
NIF3L1-208ENST00000436412 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
NIF3L1-208ENST00000436412 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
NIF3L1-208ENST00000436412 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
NIF3L1-208ENST00000436412 PRM1P04553 51 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 28.4 ms