RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 COX7CP15954 63 aa4.78□□□□□ -1.64
LINC00028-201ENST00000435497 KRTAP5-7Q6L8G8 165 aa4.77□□□□□ -1.65
LINC00028-201ENST00000435497 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
LINC00028-201ENST00000435497 H7BZZ5 65 aa4.7□□□□□ -1.66
LINC00028-201ENST00000435497 SMIM26A0A096LP01 95 aa4.69□□□□□ -1.66
LINC00028-201ENST00000435497 A0A1B0GU69 56 aa4.69□□□□□ -1.66
LINC00028-201ENST00000435497 C10orf95Q9H7T3 257 aa4.63□□□□□ -1.67
LINC00028-201ENST00000435497 A8MU10 97 aa4.6□□□□□ -1.67
LINC00028-201ENST00000435497 KRTAP20-2Q3LI61 65 aa4.6□□□□□ -1.67
LINC00028-201ENST00000435497 LCE3AQ5TA76 89 aa4.6□□□□□ -1.67
LINC00028-201ENST00000435497 TNP1P09430 55 aa4.57□□□□□ -1.68
LINC00028-201ENST00000435497 ANAPC13Q9BS18 74 aa4.57□□□□□ -1.68
LINC00028-201ENST00000435497 PRR15LQ9BU68 103 aa4.54□□□□□ -1.68
LINC00028-201ENST00000435497 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
LINC00028-201ENST00000435497 SPRR5A0A1B0GTR4 108 aa4.52□□□□□ -1.69
LINC00028-201ENST00000435497 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
LINC00028-201ENST00000435497 CCDC179H3BU77 68 aa4.45□□□□□ -1.7
LINC00028-201ENST00000435497 ATP5EP56381 51 aaPredicted RBP4.45□□□□□ -1.7
LINC00028-201ENST00000435497 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
LINC00028-201ENST00000435497 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
LINC00028-201ENST00000435497 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
LINC00028-201ENST00000435497 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
LINC00028-201ENST00000435497 UQCR11O14957 56 aa4.37□□□□□ -1.71
LINC00028-201ENST00000435497 TMEM258P61165 79 aa4.29□□□□□ -1.72
LINC00028-201ENST00000435497 K7ERS5 55 aa4.25□□□□□ -1.73
LINC00028-201ENST00000435497 MIR22HGQ0VDD5 57 aa4.25□□□□□ -1.73
LINC00028-201ENST00000435497 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
LINC00028-201ENST00000435497 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
LINC00028-201ENST00000435497 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
LINC00028-201ENST00000435497 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.74
LINC00028-201ENST00000435497 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
LINC00028-201ENST00000435497 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
LINC00028-201ENST00000435497 MUC5ACP98088 5654 aa4.13□□□□□ -1.75
LINC00028-201ENST00000435497 V9GYY9 64 aa4.13□□□□□ -1.75
LINC00028-201ENST00000435497 PSPHP1O15172 72 aa4.11□□□□□ -1.75
LINC00028-201ENST00000435497 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
LINC00028-201ENST00000435497 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
LINC00028-201ENST00000435497 MT1AP04731 61 aa4.07□□□□□ -1.76
LINC00028-201ENST00000435497 Q1T7F1 81 aa4.06□□□□□ -1.76
LINC00028-201ENST00000435497 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
LINC00028-201ENST00000435497 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
LINC00028-201ENST00000435497 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
LINC00028-201ENST00000435497 A6NED7 52 aa3.99□□□□□ -1.77
LINC00028-201ENST00000435497 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
LINC00028-201ENST00000435497 CDC42SE1Q9NRR8 79 aa3.96□□□□□ -1.78
LINC00028-201ENST00000435497 RPS28P62857 69 aaKnown RBP3.9□□□□□ -1.79
LINC00028-201ENST00000435497 ROMO1P60602 79 aa3.89□□□□□ -1.79
LINC00028-201ENST00000435497 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
LINC00028-201ENST00000435497 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
LINC00028-201ENST00000435497 MT3P25713 68 aa3.73□□□□□ -1.81
LINC00028-201ENST00000435497 PCP4P48539 62 aa3.58□□□□□ -1.84
LINC00028-201ENST00000435497 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
LINC00028-201ENST00000435497 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
LINC00028-201ENST00000435497 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
LINC00028-201ENST00000435497 BRK1Q8WUW1 75 aa3.29□□□□□ -1.88
LINC00028-201ENST00000435497 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
LINC00028-201ENST00000435497 PMAIP1Q13794 54 aa3.12□□□□□ -1.91
LINC00028-201ENST00000435497 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
LINC00028-201ENST00000435497 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
LINC00028-201ENST00000435497 PRAC1Q96KF2 57 aa2.98□□□□□ -1.93
LINC00028-201ENST00000435497 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
LINC00028-201ENST00000435497 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
LINC00028-201ENST00000435497 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
LINC00028-201ENST00000435497 SVIPQ8NHG7 77 aa2.73□□□□□ -1.97
LINC00028-201ENST00000435497 PRO0628Q9UI54 55 aa2.72□□□□□ -1.97
LINC00028-201ENST00000435497 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
LINC00028-201ENST00000435497 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
LINC00028-201ENST00000435497 KTN1-AS1Q86SY8 53 aa2.63□□□□□ -1.99
LINC00028-201ENST00000435497 LUZP6Q538Z0 58 aa2.62□□□□□ -1.99
LINC00028-201ENST00000435497 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
LINC00028-201ENST00000435497 H3BS24 57 aa2.33□□□□□ -2.04
LINC00028-201ENST00000435497 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
LINC00028-201ENST00000435497 PRM1P04553 51 aa1.96□□□□□ -2.1
LINC00028-201ENST00000435497 NDUFAF8A1L188 74 aa1.91□□□□□ -2.1
LINC00028-201ENST00000435497 A0A0A0MQY5 61 aa1.83□□□□□ -2.12
LINC00028-201ENST00000435497 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
LINC00028-201ENST00000435497 INE1O15225 51 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 31.6 ms