RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 KRTAP19-5Q3LI72 72 aa6.9□□□□□ -1.31
FAM3A-212ENST00000434658 A0A0A0MQY5 61 aa6.87□□□□□ -1.31
FAM3A-212ENST00000434658 NEBP20929 6669 aa6.87□□□□□ -1.31
FAM3A-212ENST00000434658 SPRR2FQ96RM1 72 aa6.85□□□□□ -1.31
FAM3A-212ENST00000434658 MDN1Q9NU22 5596 aa6.77□□□□□ -1.33
FAM3A-212ENST00000434658 LCE3CQ5T5A8 94 aa6.73□□□□□ -1.33
FAM3A-212ENST00000434658 SPRR2EP22531 72 aa6.68□□□□□ -1.34
FAM3A-212ENST00000434658 SPRR2BP35325 72 aa6.68□□□□□ -1.34
FAM3A-212ENST00000434658 SPRR2AP35326 72 aa6.68□□□□□ -1.34
FAM3A-212ENST00000434658 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
FAM3A-212ENST00000434658 LCE1AQ5T7P2 110 aa6.63□□□□□ -1.35
FAM3A-212ENST00000434658 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
FAM3A-212ENST00000434658 KRTAP20-1Q3LI63 56 aa6.51□□□□□ -1.37
FAM3A-212ENST00000434658 MT1EP04732 61 aa6.5□□□□□ -1.37
FAM3A-212ENST00000434658 MT1LQ93083 61 aa6.47□□□□□ -1.37
FAM3A-212ENST00000434658 SPRR2DP22532 72 aa6.46□□□□□ -1.38
FAM3A-212ENST00000434658 KRTAP2-3P0C7H8 128 aa6.43□□□□□ -1.38
FAM3A-212ENST00000434658 KRTAP2-4Q9BYR9 128 aa6.43□□□□□ -1.38
FAM3A-212ENST00000434658 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
FAM3A-212ENST00000434658 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
FAM3A-212ENST00000434658 KRTAP19-3Q7Z4W3 81 aa6.34□□□□□ -1.39
FAM3A-212ENST00000434658 INE1O15225 51 aa6.33□□□□□ -1.4
FAM3A-212ENST00000434658 LCE5AQ5TCM9 118 aa6.32□□□□□ -1.4
FAM3A-212ENST00000434658 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
FAM3A-212ENST00000434658 KRTAP2-2Q9BYT5 123 aa6.25□□□□□ -1.41
FAM3A-212ENST00000434658 KRTAP2-1Q9BYU5 128 aa6.25□□□□□ -1.41
FAM3A-212ENST00000434658 MT1GP13640 62 aa6.24□□□□□ -1.41
FAM3A-212ENST00000434658 MT1MQ8N339 61 aa6.13□□□□□ -1.43
FAM3A-212ENST00000434658 DSTQ03001 7570 aaKnown RBP6.11□□□□□ -1.43
FAM3A-212ENST00000434658 KRTAP4-3Q9BYR4 195 aa6.04□□□□□ -1.44
FAM3A-212ENST00000434658 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
FAM3A-212ENST00000434658 KRTAP4-9Q9BYQ8 210 aa5.76□□□□□ -1.49
FAM3A-212ENST00000434658 LCE4AQ5TA78 99 aa5.71□□□□□ -1.49
FAM3A-212ENST00000434658 KRTAP5-4Q6L8H1 288 aa5.66□□□□□ -1.5
FAM3A-212ENST00000434658 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
FAM3A-212ENST00000434658 MT4P47944 62 aa5.63□□□□□ -1.51
FAM3A-212ENST00000434658 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
FAM3A-212ENST00000434658 HMCN1Q96RW7 5635 aa5.52□□□□□ -1.53
FAM3A-212ENST00000434658 KRTAP4-6Q9BYQ5 205 aa5.51□□□□□ -1.53
FAM3A-212ENST00000434658 MT1AP04731 61 aa5.47□□□□□ -1.53
FAM3A-212ENST00000434658 KRTAP6-1Q3LI64 71 aa5.46□□□□□ -1.54
FAM3A-212ENST00000434658 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
FAM3A-212ENST00000434658 SYNE1Q8NF91 8797 aaKnown RBP5.35□□□□□ -1.55
FAM3A-212ENST00000434658 KRTAP20-2Q3LI61 65 aa5.33□□□□□ -1.56
FAM3A-212ENST00000434658 GPR98Q8WXG9 6306 aa5.29□□□□□ -1.56
FAM3A-212ENST00000434658 AHNAK2Q8IVF2 5795 aa5.22□□□□□ -1.57
FAM3A-212ENST00000434658 KRTAP5-3Q6L8H2 238 aa5.16□□□□□ -1.58
FAM3A-212ENST00000434658 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
FAM3A-212ENST00000434658 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
FAM3A-212ENST00000434658 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
FAM3A-212ENST00000434658 LCE3EQ5T5B0 92 aa5.07□□□□□ -1.6
FAM3A-212ENST00000434658 KRTAP5-2Q701N4 177 aa5.01□□□□□ -1.61
FAM3A-212ENST00000434658 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
FAM3A-212ENST00000434658 MT3P25713 68 aa4.91□□□□□ -1.62
FAM3A-212ENST00000434658 KRTAP5-7Q6L8G8 165 aa4.83□□□□□ -1.64
FAM3A-212ENST00000434658 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
FAM3A-212ENST00000434658 PRM1P04553 51 aa4.72□□□□□ -1.65
FAM3A-212ENST00000434658 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
FAM3A-212ENST00000434658 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
FAM3A-212ENST00000434658 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
FAM3A-212ENST00000434658 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
FAM3A-212ENST00000434658 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
FAM3A-212ENST00000434658 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
FAM3A-212ENST00000434658 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
FAM3A-212ENST00000434658 AHNAKQ09666 5890 aaKnown RBP4.21□□□□□ -1.74
FAM3A-212ENST00000434658 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
FAM3A-212ENST00000434658 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
FAM3A-212ENST00000434658 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
FAM3A-212ENST00000434658 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
FAM3A-212ENST00000434658 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
FAM3A-212ENST00000434658 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
FAM3A-212ENST00000434658 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
FAM3A-212ENST00000434658 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
FAM3A-212ENST00000434658 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
FAM3A-212ENST00000434658 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
FAM3A-212ENST00000434658 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
FAM3A-212ENST00000434658 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
FAM3A-212ENST00000434658 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 82.3 ms