RNA–Protein interactions for RNA: ENST00000434537.1

LINC01007-201, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best) BASIC

Gene LINC01007, Length 2,291 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-201ENST00000434537 LCE3AQ5TA76 89 aa3.68□□□□□ -1.82
LINC01007-201ENST00000434537 KRTAP10-7P60409 375 aaPredicted RBP3.66□□□□□ -1.82
LINC01007-201ENST00000434537 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
LINC01007-201ENST00000434537 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
LINC01007-201ENST00000434537 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
LINC01007-201ENST00000434537 KMT2DO14686 5537 aa3.61□□□□□ -1.83
LINC01007-201ENST00000434537 KRTAP8-1Q8IUC2 63 aa3.57□□□□□ -1.84
LINC01007-201ENST00000434537 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
LINC01007-201ENST00000434537 KRTAP12-3P60328 96 aa3.5□□□□□ -1.85
LINC01007-201ENST00000434537 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
LINC01007-201ENST00000434537 KRTAP4-8A0A0G2JLE6 195 aa3.49□□□□□ -1.85
LINC01007-201ENST00000434537 MT3P25713 68 aa3.49□□□□□ -1.85
LINC01007-201ENST00000434537 KRTAP4-8Q9BYQ9 185 aa3.49□□□□□ -1.85
LINC01007-201ENST00000434537 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
LINC01007-201ENST00000434537 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
LINC01007-201ENST00000434537 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
LINC01007-201ENST00000434537 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
LINC01007-201ENST00000434537 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
LINC01007-201ENST00000434537 MDN1Q9NU22 5596 aa3.4□□□□□ -1.87
LINC01007-201ENST00000434537 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
LINC01007-201ENST00000434537 SPRR2EP22531 72 aa3.35□□□□□ -1.87
LINC01007-201ENST00000434537 SPRR2BP35325 72 aa3.35□□□□□ -1.87
LINC01007-201ENST00000434537 SPRR2AP35326 72 aa3.35□□□□□ -1.87
LINC01007-201ENST00000434537 LCE1DQ5T752 114 aa3.34□□□□□ -1.87
LINC01007-201ENST00000434537 KRTAP2-1Q9BYU5 128 aa3.33□□□□□ -1.88
LINC01007-201ENST00000434537 SPRR2FQ96RM1 72 aa3.32□□□□□ -1.88
LINC01007-201ENST00000434537 MT1EP04732 61 aa3.29□□□□□ -1.88
LINC01007-201ENST00000434537 MT1LQ93083 61 aa3.25□□□□□ -1.89
LINC01007-201ENST00000434537 LOC100996750A0A140TA64 210 aa3.24□□□□□ -1.89
LINC01007-201ENST00000434537 SPRR2DP22532 72 aa3.24□□□□□ -1.89
LINC01007-201ENST00000434537 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
LINC01007-201ENST00000434537 KRTAP4-7Q9BYR0 210 aa3.23□□□□□ -1.89
LINC01007-201ENST00000434537 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
LINC01007-201ENST00000434537 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
LINC01007-201ENST00000434537 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
LINC01007-201ENST00000434537 LCE3BQ5TA77 95 aa3.17□□□□□ -1.9
LINC01007-201ENST00000434537 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
LINC01007-201ENST00000434537 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
LINC01007-201ENST00000434537 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
LINC01007-201ENST00000434537 MT1GP13640 62 aa3.09□□□□□ -1.92
LINC01007-201ENST00000434537 MT1MQ8N339 61 aa3.09□□□□□ -1.92
LINC01007-201ENST00000434537 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
LINC01007-201ENST00000434537 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
LINC01007-201ENST00000434537 KRTAP4-9Q9BYQ8 210 aa3.02□□□□□ -1.93
LINC01007-201ENST00000434537 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
LINC01007-201ENST00000434537 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
LINC01007-201ENST00000434537 MT4P47944 62 aa2.85□□□□□ -1.95
LINC01007-201ENST00000434537 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.96
LINC01007-201ENST00000434537 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
LINC01007-201ENST00000434537 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
LINC01007-201ENST00000434537 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
LINC01007-201ENST00000434537 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
LINC01007-201ENST00000434537 MT1AP04731 61 aa2.73□□□□□ -1.97
LINC01007-201ENST00000434537 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
LINC01007-201ENST00000434537 SYNE1Q8NF91 8797 aaKnown RBP2.7□□□□□ -1.98
LINC01007-201ENST00000434537 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
LINC01007-201ENST00000434537 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
LINC01007-201ENST00000434537 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
LINC01007-201ENST00000434537 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
LINC01007-201ENST00000434537 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
LINC01007-201ENST00000434537 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
LINC01007-201ENST00000434537 PRM1P04553 51 aa2.43□□□□□ -2.02
LINC01007-201ENST00000434537 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
LINC01007-201ENST00000434537 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
LINC01007-201ENST00000434537 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
LINC01007-201ENST00000434537 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
LINC01007-201ENST00000434537 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
LINC01007-201ENST00000434537 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
LINC01007-201ENST00000434537 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
LINC01007-201ENST00000434537 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
LINC01007-201ENST00000434537 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.12
LINC01007-201ENST00000434537 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
LINC01007-201ENST00000434537 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
LINC01007-201ENST00000434537 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
LINC01007-201ENST00000434537 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
LINC01007-201ENST00000434537 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
LINC01007-201ENST00000434537 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 32.8 ms