RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.58
SCRN1-207ENST00000434476 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
SCRN1-207ENST00000434476 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
SCRN1-207ENST00000434476 USH2AO75445 5202 aa4.93□□□□□ -1.62
SCRN1-207ENST00000434476 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
SCRN1-207ENST00000434476 KRTAP19-6Q3LI70 58 aa4.83□□□□□ -1.64
SCRN1-207ENST00000434476 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
SCRN1-207ENST00000434476 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
SCRN1-207ENST00000434476 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
SCRN1-207ENST00000434476 MT1EP04732 61 aa4.68□□□□□ -1.66
SCRN1-207ENST00000434476 KMT2DO14686 5537 aa4.67□□□□□ -1.66
SCRN1-207ENST00000434476 MT1LQ93083 61 aa4.64□□□□□ -1.67
SCRN1-207ENST00000434476 CRCT1Q9UGL9 99 aa4.6□□□□□ -1.67
SCRN1-207ENST00000434476 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
SCRN1-207ENST00000434476 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
SCRN1-207ENST00000434476 INE1O15225 51 aa4.48□□□□□ -1.69
SCRN1-207ENST00000434476 FCGBPQ9Y6R7 5405 aaPredicted RBP4.45□□□□□ -1.7
SCRN1-207ENST00000434476 MT1GP13640 62 aa4.43□□□□□ -1.7
SCRN1-207ENST00000434476 KRTAP19-3Q7Z4W3 81 aa4.42□□□□□ -1.7
SCRN1-207ENST00000434476 KRTAP2-3P0C7H8 128 aa4.4□□□□□ -1.71
SCRN1-207ENST00000434476 KRTAP2-4Q9BYR9 128 aa4.4□□□□□ -1.71
SCRN1-207ENST00000434476 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.71
SCRN1-207ENST00000434476 MT1MQ8N339 61 aa4.37□□□□□ -1.71
SCRN1-207ENST00000434476 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
SCRN1-207ENST00000434476 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
SCRN1-207ENST00000434476 MUC12Q9UKN1 5478 aa4.21□□□□□ -1.73
SCRN1-207ENST00000434476 MACF1Q9UPN3 7388 aaKnown RBP4.16□□□□□ -1.74
SCRN1-207ENST00000434476 KRTAP5-9P26371 169 aa4.15□□□□□ -1.75
SCRN1-207ENST00000434476 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
SCRN1-207ENST00000434476 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
SCRN1-207ENST00000434476 KRTAP6-3Q3LI67 103 aa4.04□□□□□ -1.76
SCRN1-207ENST00000434476 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
SCRN1-207ENST00000434476 SPRR2EP22531 72 aa3.98□□□□□ -1.77
SCRN1-207ENST00000434476 SPRR2BP35325 72 aa3.98□□□□□ -1.77
SCRN1-207ENST00000434476 SPRR2AP35326 72 aa3.98□□□□□ -1.77
SCRN1-207ENST00000434476 MT1AP04731 61 aa3.94□□□□□ -1.78
SCRN1-207ENST00000434476 MDN1Q9NU22 5596 aa3.92□□□□□ -1.78
SCRN1-207ENST00000434476 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
SCRN1-207ENST00000434476 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
SCRN1-207ENST00000434476 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
SCRN1-207ENST00000434476 SPRR2DP22532 72 aa3.83□□□□□ -1.8
SCRN1-207ENST00000434476 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
SCRN1-207ENST00000434476 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
SCRN1-207ENST00000434476 NEBP20929 6669 aa3.76□□□□□ -1.81
SCRN1-207ENST00000434476 KRTAP20-1Q3LI63 56 aa3.69□□□□□ -1.82
SCRN1-207ENST00000434476 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
SCRN1-207ENST00000434476 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
SCRN1-207ENST00000434476 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
SCRN1-207ENST00000434476 MT3P25713 68 aa3.57□□□□□ -1.84
SCRN1-207ENST00000434476 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
SCRN1-207ENST00000434476 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
SCRN1-207ENST00000434476 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
SCRN1-207ENST00000434476 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
SCRN1-207ENST00000434476 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
SCRN1-207ENST00000434476 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
SCRN1-207ENST00000434476 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
SCRN1-207ENST00000434476 PRM1P04553 51 aa3.3□□□□□ -1.88
SCRN1-207ENST00000434476 MT4P47944 62 aa3.3□□□□□ -1.88
SCRN1-207ENST00000434476 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
SCRN1-207ENST00000434476 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
SCRN1-207ENST00000434476 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
SCRN1-207ENST00000434476 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
SCRN1-207ENST00000434476 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
SCRN1-207ENST00000434476 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
SCRN1-207ENST00000434476 KRTAP5-10Q6L8G5 202 aa2.82□□□□□ -1.96
SCRN1-207ENST00000434476 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
SCRN1-207ENST00000434476 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
SCRN1-207ENST00000434476 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
SCRN1-207ENST00000434476 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
SCRN1-207ENST00000434476 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
SCRN1-207ENST00000434476 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
SCRN1-207ENST00000434476 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
SCRN1-207ENST00000434476 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
SCRN1-207ENST00000434476 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
SCRN1-207ENST00000434476 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
SCRN1-207ENST00000434476 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
SCRN1-207ENST00000434476 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 141.2 ms