RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 H1FX-AS1Q4G0G2 97 aa2.55□□□□□ -2
RFC3-202ENST00000434425 C9orf92A6NGG3 77 aa2.54□□□□□ -2
RFC3-202ENST00000434425 KRTAP13-4Q3LI77 160 aa2.53□□□□□ -2
RFC3-202ENST00000434425 FCGBPQ9Y6R7 5405 aaPredicted RBP2.53□□□□□ -2.01
RFC3-202ENST00000434425 M0R2T5 61 aa2.52□□□□□ -2.01
RFC3-202ENST00000434425 KRTAP10-12P60413 245 aa2.52□□□□□ -2.01
RFC3-202ENST00000434425 SYNE2Q8WXH0 6885 aaKnown RBP2.51□□□□□ -2.01
RFC3-202ENST00000434425 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
RFC3-202ENST00000434425 LCE3CQ5T5A8 94 aa2.49□□□□□ -2.01
RFC3-202ENST00000434425 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
RFC3-202ENST00000434425 S4R3F8 94 aa2.42□□□□□ -2.02
RFC3-202ENST00000434425 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
RFC3-202ENST00000434425 MT2AP02795 61 aa2.38□□□□□ -2.03
RFC3-202ENST00000434425 MT1FP04733 61 aa2.37□□□□□ -2.03
RFC3-202ENST00000434425 M0QZ58 72 aa2.35□□□□□ -2.03
RFC3-202ENST00000434425 KRTAP10-5P60370 271 aa2.35□□□□□ -2.03
RFC3-202ENST00000434425 KRTAP10-10P60014 251 aa2.34□□□□□ -2.03
RFC3-202ENST00000434425 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
RFC3-202ENST00000434425 KRTAP12-1P59990 96 aa2.33□□□□□ -2.04
RFC3-202ENST00000434425 KRTAP6-3Q3LI67 103 aa2.33□□□□□ -2.04
RFC3-202ENST00000434425 KRTAP19-6Q3LI70 58 aa2.33□□□□□ -2.04
RFC3-202ENST00000434425 A0A0D9SG42 100 aa2.32□□□□□ -2.04
RFC3-202ENST00000434425 NEBP20929 6669 aa2.31□□□□□ -2.04
RFC3-202ENST00000434425 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
RFC3-202ENST00000434425 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
RFC3-202ENST00000434425 MDN1Q9NU22 5596 aa2.24□□□□□ -2.05
RFC3-202ENST00000434425 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
RFC3-202ENST00000434425 KMT2DO14686 5537 aa2.21□□□□□ -2.06
RFC3-202ENST00000434425 KRTAP9-6A8MVA2 160 aa2.16□□□□□ -2.06
RFC3-202ENST00000434425 KRTAP2-3P0C7H8 128 aa2.14□□□□□ -2.07
RFC3-202ENST00000434425 KRTAP2-4Q9BYR9 128 aa2.14□□□□□ -2.07
RFC3-202ENST00000434425 MT1BP07438 61 aa2.12□□□□□ -2.07
RFC3-202ENST00000434425 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
RFC3-202ENST00000434425 SPRR2GQ9BYE4 73 aa2.09□□□□□ -2.07
RFC3-202ENST00000434425 KRTAP19-8Q3LI54 63 aa2.07□□□□□ -2.08
RFC3-202ENST00000434425 TNP1P09430 55 aa2.07□□□□□ -2.08
RFC3-202ENST00000434425 SPRR2EP22531 72 aa2.06□□□□□ -2.08
RFC3-202ENST00000434425 SPRR2BP35325 72 aa2.06□□□□□ -2.08
RFC3-202ENST00000434425 SPRR2AP35326 72 aa2.06□□□□□ -2.08
RFC3-202ENST00000434425 KRTAP2-1Q9BYU5 128 aa2.06□□□□□ -2.08
RFC3-202ENST00000434425 SPRR2FQ96RM1 72 aa2.05□□□□□ -2.08
RFC3-202ENST00000434425 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
RFC3-202ENST00000434425 SPRR2DP22532 72 aa1.99□□□□□ -2.09
RFC3-202ENST00000434425 KRTAP8-1Q8IUC2 63 aa1.97□□□□□ -2.09
RFC3-202ENST00000434425 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
RFC3-202ENST00000434425 MT1XP80297 61 aa1.94□□□□□ -2.1
RFC3-202ENST00000434425 DSTQ03001 7570 aaKnown RBP1.94□□□□□ -2.1
RFC3-202ENST00000434425 LCE3AQ5TA76 89 aa1.94□□□□□ -2.1
RFC3-202ENST00000434425 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
RFC3-202ENST00000434425 KRTAP12-3P60328 96 aa1.86□□□□□ -2.11
RFC3-202ENST00000434425 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
RFC3-202ENST00000434425 MT4P47944 62 aa1.77□□□□□ -2.13
RFC3-202ENST00000434425 KRTAP19-5Q3LI72 72 aa1.77□□□□□ -2.13
RFC3-202ENST00000434425 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
RFC3-202ENST00000434425 KRTAP19-3Q7Z4W3 81 aa1.75□□□□□ -2.13
RFC3-202ENST00000434425 KRTAP19-7Q3SYF9 63 aa1.75□□□□□ -2.13
RFC3-202ENST00000434425 MT1EP04732 61 aa1.73□□□□□ -2.13
RFC3-202ENST00000434425 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
RFC3-202ENST00000434425 KRTAP5-5Q701N2 237 aaPredicted RBP1.7□□□□□ -2.14
RFC3-202ENST00000434425 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
RFC3-202ENST00000434425 MT1GP13640 62 aa1.69□□□□□ -2.14
RFC3-202ENST00000434425 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
RFC3-202ENST00000434425 LCE1BQ5T7P3 118 aa1.69□□□□□ -2.14
RFC3-202ENST00000434425 MT1LQ93083 61 aa1.68□□□□□ -2.14
RFC3-202ENST00000434425 MT1MQ8N339 61 aa1.66□□□□□ -2.14
RFC3-202ENST00000434425 KRTAP20-2Q3LI61 65 aa1.61□□□□□ -2.15
RFC3-202ENST00000434425 SYNE1Q8NF91 8797 aaKnown RBP1.54□□□□□ -2.16
RFC3-202ENST00000434425 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
RFC3-202ENST00000434425 PRM1P04553 51 aa1.5□□□□□ -2.17
RFC3-202ENST00000434425 MT1AP04731 61 aa1.45□□□□□ -2.18
RFC3-202ENST00000434425 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
RFC3-202ENST00000434425 KRTAP6-1Q3LI64 71 aa1.4□□□□□ -2.19
RFC3-202ENST00000434425 KRTAP6-2Q3LI66 62 aa1.37□□□□□ -2.19
RFC3-202ENST00000434425 KRTAP21-2Q3LI59 83 aa1.26□□□□□ -2.21
RFC3-202ENST00000434425 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
RFC3-202ENST00000434425 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
RFC3-202ENST00000434425 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 136.1 ms