RNA–Protein interactions for RNA: ENST00000434152.5

APOE-203, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-203ENST00000434152 KRTAP19-5Q3LI72 72 aa7.45□□□□□ -1.22
APOE-203ENST00000434152 LCE3AQ5TA76 89 aa7.44□□□□□ -1.22
APOE-203ENST00000434152 DSTQ03001 7570 aaKnown RBP7.43□□□□□ -1.22
APOE-203ENST00000434152 KRTAP19-3Q7Z4W3 81 aa7.42□□□□□ -1.22
APOE-203ENST00000434152 KRTAP25-1Q3LHN0 102 aa7.38□□□□□ -1.23
APOE-203ENST00000434152 CDC42SE1Q9NRR8 79 aa7.33□□□□□ -1.24
APOE-203ENST00000434152 MT1GP13640 62 aa7.31□□□□□ -1.24
APOE-203ENST00000434152 KRTAP4-9Q9BYQ8 210 aa7.28□□□□□ -1.24
APOE-203ENST00000434152 PP632Q6XCG6 107 aa7.24□□□□□ -1.25
APOE-203ENST00000434152 MT1LQ93083 61 aa7.23□□□□□ -1.25
APOE-203ENST00000434152 KRTAP12-3P60328 96 aa7.18□□□□□ -1.26
APOE-203ENST00000434152 KRTAP23-1A1A580 65 aa7.17□□□□□ -1.26
APOE-203ENST00000434152 ROMO1P60602 79 aa7.15□□□□□ -1.26
APOE-203ENST00000434152 MT1MQ8N339 61 aa7.13□□□□□ -1.27
APOE-203ENST00000434152 LCE1DQ5T752 114 aa7.07□□□□□ -1.28
APOE-203ENST00000434152 LCE4AQ5TA78 99 aa7.01□□□□□ -1.29
APOE-203ENST00000434152 MT4P47944 62 aa6.97□□□□□ -1.29
APOE-203ENST00000434152 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
APOE-203ENST00000434152 KRTAP4-3Q9BYR4 195 aa6.97□□□□□ -1.29
APOE-203ENST00000434152 HMCN1Q96RW7 5635 aa6.94□□□□□ -1.3
APOE-203ENST00000434152 BRK1Q8WUW1 75 aa6.91□□□□□ -1.3
APOE-203ENST00000434152 KRTAP5-4Q6L8H1 288 aa6.87□□□□□ -1.31
APOE-203ENST00000434152 KRTAP4-7Q9BYR0 210 aa6.87□□□□□ -1.31
APOE-203ENST00000434152 KRTAP15-1Q3LI76 137 aa6.83□□□□□ -1.32
APOE-203ENST00000434152 AHNAK2Q8IVF2 5795 aa6.83□□□□□ -1.32
APOE-203ENST00000434152 KRTAP4-6Q9BYQ5 205 aa6.78□□□□□ -1.32
APOE-203ENST00000434152 KRTAP5-10Q6L8G5 202 aa6.76□□□□□ -1.33
APOE-203ENST00000434152 LCE3CQ5T5A8 94 aa6.65□□□□□ -1.34
APOE-203ENST00000434152 KRTAP5-7Q6L8G8 165 aa6.58□□□□□ -1.36
APOE-203ENST00000434152 KRTAP5-5Q701N2 237 aaPredicted RBP6.55□□□□□ -1.36
APOE-203ENST00000434152 PMAIP1Q13794 54 aa6.52□□□□□ -1.37
APOE-203ENST00000434152 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
APOE-203ENST00000434152 KRTAP20-2Q3LI61 65 aa6.49□□□□□ -1.37
APOE-203ENST00000434152 KRTAP5-3Q6L8H2 238 aa6.49□□□□□ -1.37
APOE-203ENST00000434152 SPRR5A0A1B0GTR4 108 aa6.43□□□□□ -1.38
APOE-203ENST00000434152 KRTAP12-4P60329 112 aa6.39□□□□□ -1.39
APOE-203ENST00000434152 SYNE1Q8NF91 8797 aaKnown RBP6.38□□□□□ -1.39
APOE-203ENST00000434152 PRO0628Q9UI54 55 aa6.29□□□□□ -1.4
APOE-203ENST00000434152 KRTAP9-6A8MVA2 160 aa6.22□□□□□ -1.41
APOE-203ENST00000434152 MT1AP04731 61 aa6.18□□□□□ -1.42
APOE-203ENST00000434152 PRAC1Q96KF2 57 aa6.16□□□□□ -1.42
APOE-203ENST00000434152 KRTAP6-1Q3LI64 71 aa6.08□□□□□ -1.44
APOE-203ENST00000434152 KRTAP5-2Q701N4 177 aa5.98□□□□□ -1.45
APOE-203ENST00000434152 KRTAP4-11Q9BYQ6 195 aa5.97□□□□□ -1.45
APOE-203ENST00000434152 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
APOE-203ENST00000434152 KRTAP9-4Q9BYQ2 154 aa5.95□□□□□ -1.46
APOE-203ENST00000434152 AHNAKQ09666 5890 aaKnown RBP5.8□□□□□ -1.48
APOE-203ENST00000434152 KRTAP6-2Q3LI66 62 aa5.78□□□□□ -1.48
APOE-203ENST00000434152 KRTAP5-8O75690 187 aa5.77□□□□□ -1.49
APOE-203ENST00000434152 MUC5ACP98088 5654 aa5.77□□□□□ -1.49
APOE-203ENST00000434152 MUC5BQ9HC84 5762 aaPredicted RBP5.72□□□□□ -1.49
APOE-203ENST00000434152 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
APOE-203ENST00000434152 OBSCNQ5VST9 7968 aa5.68□□□□□ -1.5
APOE-203ENST00000434152 MT3P25713 68 aa5.65□□□□□ -1.5
APOE-203ENST00000434152 KRTAP9-9Q9BYP9 154 aa5.53□□□□□ -1.52
APOE-203ENST00000434152 KRTAP5-1Q6L8H4 278 aa5.41□□□□□ -1.54
APOE-203ENST00000434152 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
APOE-203ENST00000434152 LCE1EQ5T753 118 aa5.17□□□□□ -1.58
APOE-203ENST00000434152 LCE3DQ9BYE3 92 aa4.87□□□□□ -1.63
APOE-203ENST00000434152 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
APOE-203ENST00000434152 LCE1BQ5T7P3 118 aa4.84□□□□□ -1.63
APOE-203ENST00000434152 LCE1CQ5T751 118 aa4.78□□□□□ -1.64
APOE-203ENST00000434152 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
APOE-203ENST00000434152 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
APOE-203ENST00000434152 NDUFAF8A1L188 74 aa4.46□□□□□ -1.7
APOE-203ENST00000434152 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
APOE-203ENST00000434152 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
APOE-203ENST00000434152 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
APOE-203ENST00000434152 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
APOE-203ENST00000434152 PHGR1C9JFL3 82 aa4.01□□□□□ -1.77
APOE-203ENST00000434152 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
APOE-203ENST00000434152 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
APOE-203ENST00000434152 INE1O15225 51 aa3.66□□□□□ -1.82
APOE-203ENST00000434152 PRM1P04553 51 aa3.66□□□□□ -1.82
APOE-203ENST00000434152 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
APOE-203ENST00000434152 H3BS24 57 aa3.51□□□□□ -1.85
APOE-203ENST00000434152 KRTAP21-1Q3LI58 79 aa3.06□□□□□ -1.92
APOE-203ENST00000434152 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 129.5 ms