RNA–Protein interactions for RNA: ENST00000433436.6

CLTA-204, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-204ENST00000433436 A6NED7 52 aa8.32□□□□□ -1.08
CLTA-204ENST00000433436 MT1GP13640 62 aa8.26□□□□□ -1.09
CLTA-204ENST00000433436 MT1LQ93083 61 aa8.22□□□□□ -1.09
CLTA-204ENST00000433436 KRTAP25-1Q3LHN0 102 aa8.2□□□□□ -1.1
CLTA-204ENST00000433436 PP632Q6XCG6 107 aa8.19□□□□□ -1.1
CLTA-204ENST00000433436 KRTAP12-3P60328 96 aa8.13□□□□□ -1.11
CLTA-204ENST00000433436 MT1MQ8N339 61 aa8.13□□□□□ -1.11
CLTA-204ENST00000433436 DSTQ03001 7570 aaKnown RBP8.12□□□□□ -1.11
CLTA-204ENST00000433436 CDC42SE1Q9NRR8 79 aa7.98□□□□□ -1.13
CLTA-204ENST00000433436 KRTAP4-3Q9BYR4 195 aa7.97□□□□□ -1.13
CLTA-204ENST00000433436 GPR98Q8WXG9 6306 aa7.96□□□□□ -1.14
CLTA-204ENST00000433436 KRTAP23-1A1A580 65 aa7.88□□□□□ -1.15
CLTA-204ENST00000433436 KRTAP4-7Q9BYR0 210 aa7.88□□□□□ -1.15
CLTA-204ENST00000433436 ROMO1P60602 79 aa7.87□□□□□ -1.15
CLTA-204ENST00000433436 KRTAP4-9Q9BYQ8 210 aa7.8□□□□□ -1.16
CLTA-204ENST00000433436 KRTAP15-1Q3LI76 137 aa7.68□□□□□ -1.18
CLTA-204ENST00000433436 LCE4AQ5TA78 99 aa7.67□□□□□ -1.18
CLTA-204ENST00000433436 LCE1DQ5T752 114 aa7.63□□□□□ -1.19
CLTA-204ENST00000433436 MT4P47944 62 aa7.61□□□□□ -1.19
CLTA-204ENST00000433436 KRTAP19-4Q3LI73 84 aa7.61□□□□□ -1.19
CLTA-204ENST00000433436 KRTAP5-4Q6L8H1 288 aa7.57□□□□□ -1.2
CLTA-204ENST00000433436 LCE3CQ5T5A8 94 aa7.51□□□□□ -1.21
CLTA-204ENST00000433436 LOC100996750A0A140TA64 210 aa7.45□□□□□ -1.22
CLTA-204ENST00000433436 BRK1Q8WUW1 75 aa7.42□□□□□ -1.22
CLTA-204ENST00000433436 KRTAP4-6Q9BYQ5 205 aa7.41□□□□□ -1.22
CLTA-204ENST00000433436 KRTAP5-5Q701N2 237 aaPredicted RBP7.4□□□□□ -1.22
CLTA-204ENST00000433436 HMCN1Q96RW7 5635 aa7.38□□□□□ -1.23
CLTA-204ENST00000433436 KRTAP5-10Q6L8G5 202 aa7.19□□□□□ -1.26
CLTA-204ENST00000433436 AHNAK2Q8IVF2 5795 aa7.19□□□□□ -1.26
CLTA-204ENST00000433436 KRTAP12-4P60329 112 aa7.17□□□□□ -1.26
CLTA-204ENST00000433436 KRTAP20-2Q3LI61 65 aa7.15□□□□□ -1.26
CLTA-204ENST00000433436 SPRR5A0A1B0GTR4 108 aa7.12□□□□□ -1.27
CLTA-204ENST00000433436 KRTAP9-6A8MVA2 160 aa7.08□□□□□ -1.28
CLTA-204ENST00000433436 SYNE1Q8NF91 8797 aaKnown RBP7.05□□□□□ -1.28
CLTA-204ENST00000433436 MT1AP04731 61 aa6.99□□□□□ -1.29
CLTA-204ENST00000433436 PMAIP1Q13794 54 aa6.98□□□□□ -1.29
CLTA-204ENST00000433436 KRTAP5-7Q6L8G8 165 aa6.98□□□□□ -1.29
CLTA-204ENST00000433436 KRTAP6-1Q3LI64 71 aa6.96□□□□□ -1.3
CLTA-204ENST00000433436 KRTAP5-3Q6L8H2 238 aa6.92□□□□□ -1.3
CLTA-204ENST00000433436 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
CLTA-204ENST00000433436 PRAC1Q96KF2 57 aa6.7□□□□□ -1.34
CLTA-204ENST00000433436 KRTAP5-2Q701N4 177 aa6.68□□□□□ -1.34
CLTA-204ENST00000433436 PRO0628Q9UI54 55 aa6.62□□□□□ -1.35
CLTA-204ENST00000433436 KRTAP6-2Q3LI66 62 aa6.6□□□□□ -1.35
CLTA-204ENST00000433436 KRTAP4-11Q9BYQ6 195 aa6.46□□□□□ -1.38
CLTA-204ENST00000433436 MT3P25713 68 aa6.39□□□□□ -1.39
CLTA-204ENST00000433436 KTN1-AS1Q86SY8 53 aa6.29□□□□□ -1.4
CLTA-204ENST00000433436 KRTAP5-8O75690 187 aa6.24□□□□□ -1.41
CLTA-204ENST00000433436 OBSCNQ5VST9 7968 aa6.18□□□□□ -1.42
CLTA-204ENST00000433436 SVIPQ8NHG7 77 aa6.06□□□□□ -1.44
CLTA-204ENST00000433436 MUC5ACP98088 5654 aa6.06□□□□□ -1.44
CLTA-204ENST00000433436 AHNAKQ09666 5890 aaKnown RBP6.05□□□□□ -1.44
CLTA-204ENST00000433436 MUC5BQ9HC84 5762 aaPredicted RBP6.04□□□□□ -1.44
CLTA-204ENST00000433436 KRTAP5-1Q6L8H4 278 aa5.95□□□□□ -1.46
CLTA-204ENST00000433436 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
CLTA-204ENST00000433436 LCE1EQ5T753 118 aa5.78□□□□□ -1.48
CLTA-204ENST00000433436 LUZP6Q538Z0 58 aa5.6□□□□□ -1.51
CLTA-204ENST00000433436 LCE1BQ5T7P3 118 aa5.49□□□□□ -1.53
CLTA-204ENST00000433436 LCE3DQ9BYE3 92 aa5.46□□□□□ -1.54
CLTA-204ENST00000433436 KRTAP4-2Q9BYR5 136 aa5.45□□□□□ -1.54
CLTA-204ENST00000433436 KRTAP4-12Q9BQ66 201 aa5.42□□□□□ -1.54
CLTA-204ENST00000433436 LCE1CQ5T751 118 aa5.37□□□□□ -1.55
CLTA-204ENST00000433436 LCE3EQ5T5B0 92 aa5.18□□□□□ -1.58
CLTA-204ENST00000433436 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.9□□□□□ -1.63
CLTA-204ENST00000433436 KRTAP5-11Q6L8G4 156 aa4.82□□□□□ -1.64
CLTA-204ENST00000433436 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
CLTA-204ENST00000433436 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
CLTA-204ENST00000433436 H3BS24 57 aa4.62□□□□□ -1.67
CLTA-204ENST00000433436 KRTAP21-2Q3LI59 83 aa4.56□□□□□ -1.68
CLTA-204ENST00000433436 PHGR1C9JFL3 82 aa4.19□□□□□ -1.74
CLTA-204ENST00000433436 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
CLTA-204ENST00000433436 PRM1P04553 51 aa4.06□□□□□ -1.76
CLTA-204ENST00000433436 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
CLTA-204ENST00000433436 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
CLTA-204ENST00000433436 INE1O15225 51 aa3.77□□□□□ -1.81
CLTA-204ENST00000433436 KRTAP21-1Q3LI58 79 aa3.18□□□□□ -1.9
CLTA-204ENST00000433436 MUC16Q8WXI7 14507 aa2.7□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 6.9 ms