RNA–Protein interactions for RNA: ENST00000432786.5

ARPC1A-202, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 5

Gene ARPC1A, Length 1,516 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-202ENST00000432786 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
ARPC1A-202ENST00000432786 NEBP20929 6669 aa5.25□□□□□ -1.57
ARPC1A-202ENST00000432786 SPRR2FQ96RM1 72 aa5.22□□□□□ -1.57
ARPC1A-202ENST00000432786 MDN1Q9NU22 5596 aa5.2□□□□□ -1.58
ARPC1A-202ENST00000432786 MT1LQ93083 61 aa5.18□□□□□ -1.58
ARPC1A-202ENST00000432786 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
ARPC1A-202ENST00000432786 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
ARPC1A-202ENST00000432786 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
ARPC1A-202ENST00000432786 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
ARPC1A-202ENST00000432786 MT1GP13640 62 aa5.06□□□□□ -1.6
ARPC1A-202ENST00000432786 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
ARPC1A-202ENST00000432786 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
ARPC1A-202ENST00000432786 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
ARPC1A-202ENST00000432786 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
ARPC1A-202ENST00000432786 MT1MQ8N339 61 aa5□□□□□ -1.61
ARPC1A-202ENST00000432786 SPRR2EP22531 72 aa4.99□□□□□ -1.61
ARPC1A-202ENST00000432786 SPRR2BP35325 72 aa4.99□□□□□ -1.61
ARPC1A-202ENST00000432786 SPRR2AP35326 72 aa4.99□□□□□ -1.61
ARPC1A-202ENST00000432786 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
ARPC1A-202ENST00000432786 KRTAP9-4Q9BYQ2 154 aa4.97□□□□□ -1.61
ARPC1A-202ENST00000432786 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
ARPC1A-202ENST00000432786 KRTAP20-1Q3LI63 56 aa4.95□□□□□ -1.62
ARPC1A-202ENST00000432786 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
ARPC1A-202ENST00000432786 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
ARPC1A-202ENST00000432786 KRTAP4-3Q9BYR4 195 aa4.85□□□□□ -1.63
ARPC1A-202ENST00000432786 SPRR2DP22532 72 aa4.82□□□□□ -1.64
ARPC1A-202ENST00000432786 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
ARPC1A-202ENST00000432786 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
ARPC1A-202ENST00000432786 DSTQ03001 7570 aaKnown RBP4.73□□□□□ -1.65
ARPC1A-202ENST00000432786 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
ARPC1A-202ENST00000432786 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
ARPC1A-202ENST00000432786 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
ARPC1A-202ENST00000432786 KRTAP4-9Q9BYQ8 210 aa4.65□□□□□ -1.67
ARPC1A-202ENST00000432786 KRTAP5-5Q701N2 237 aaPredicted RBP4.56□□□□□ -1.68
ARPC1A-202ENST00000432786 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
ARPC1A-202ENST00000432786 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
ARPC1A-202ENST00000432786 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
ARPC1A-202ENST00000432786 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
ARPC1A-202ENST00000432786 MT1AP04731 61 aa4.41□□□□□ -1.7
ARPC1A-202ENST00000432786 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
ARPC1A-202ENST00000432786 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
ARPC1A-202ENST00000432786 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
ARPC1A-202ENST00000432786 H3BS24 57 aa4.26□□□□□ -1.73
ARPC1A-202ENST00000432786 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
ARPC1A-202ENST00000432786 MT4P47944 62 aa4.21□□□□□ -1.74
ARPC1A-202ENST00000432786 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
ARPC1A-202ENST00000432786 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
ARPC1A-202ENST00000432786 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
ARPC1A-202ENST00000432786 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
ARPC1A-202ENST00000432786 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
ARPC1A-202ENST00000432786 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
ARPC1A-202ENST00000432786 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
ARPC1A-202ENST00000432786 MT3P25713 68 aa3.97□□□□□ -1.77
ARPC1A-202ENST00000432786 A0A0A0MQY5 61 aa3.9□□□□□ -1.78
ARPC1A-202ENST00000432786 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.78
ARPC1A-202ENST00000432786 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
ARPC1A-202ENST00000432786 INE1O15225 51 aa3.74□□□□□ -1.81
ARPC1A-202ENST00000432786 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
ARPC1A-202ENST00000432786 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
ARPC1A-202ENST00000432786 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
ARPC1A-202ENST00000432786 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
ARPC1A-202ENST00000432786 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
ARPC1A-202ENST00000432786 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
ARPC1A-202ENST00000432786 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
ARPC1A-202ENST00000432786 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
ARPC1A-202ENST00000432786 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
ARPC1A-202ENST00000432786 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
ARPC1A-202ENST00000432786 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
ARPC1A-202ENST00000432786 PRM1P04553 51 aa3.12□□□□□ -1.91
ARPC1A-202ENST00000432786 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.92
ARPC1A-202ENST00000432786 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
ARPC1A-202ENST00000432786 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
ARPC1A-202ENST00000432786 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
ARPC1A-202ENST00000432786 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
ARPC1A-202ENST00000432786 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
ARPC1A-202ENST00000432786 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
ARPC1A-202ENST00000432786 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
ARPC1A-202ENST00000432786 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 61.4 ms