RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 PSPHP1O15172 72 aa5.32□□□□□ -1.56
PRKDC-203ENST00000432581 SEC61GP60059 68 aa5.31□□□□□ -1.56
PRKDC-203ENST00000432581 MT1MQ8N339 61 aa5.31□□□□□ -1.56
PRKDC-203ENST00000432581 MT1LQ93083 61 aa5.27□□□□□ -1.57
PRKDC-203ENST00000432581 SPINT4Q6UDR6 99 aa5.26□□□□□ -1.57
PRKDC-203ENST00000432581 AHNAK2Q8IVF2 5795 aa5.25□□□□□ -1.57
PRKDC-203ENST00000432581 KRTAP5-10Q6L8G5 202 aa5.25□□□□□ -1.57
PRKDC-203ENST00000432581 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
PRKDC-203ENST00000432581 SPATA8Q6RVD6 105 aa5.22□□□□□ -1.57
PRKDC-203ENST00000432581 A6NED7 52 aa5.19□□□□□ -1.58
PRKDC-203ENST00000432581 A0A1B0GU33 70 aa5.18□□□□□ -1.58
PRKDC-203ENST00000432581 UQCR11O14957 56 aa5.18□□□□□ -1.58
PRKDC-203ENST00000432581 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
PRKDC-203ENST00000432581 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
PRKDC-203ENST00000432581 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
PRKDC-203ENST00000432581 CDC42SE1Q9NRR8 79 aa5.12□□□□□ -1.59
PRKDC-203ENST00000432581 MIR22HGQ0VDD5 57 aa5.11□□□□□ -1.59
PRKDC-203ENST00000432581 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
PRKDC-203ENST00000432581 KRTAP5-7Q6L8G8 165 aa5.1□□□□□ -1.59
PRKDC-203ENST00000432581 BRK1Q8WUW1 75 aa5.1□□□□□ -1.59
PRKDC-203ENST00000432581 TNP1P09430 55 aa5.06□□□□□ -1.6
PRKDC-203ENST00000432581 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
PRKDC-203ENST00000432581 A8MU10 97 aa5.04□□□□□ -1.6
PRKDC-203ENST00000432581 KRTAP20-2Q3LI61 65 aa4.98□□□□□ -1.61
PRKDC-203ENST00000432581 PRO0628Q9UI54 55 aa4.98□□□□□ -1.61
PRKDC-203ENST00000432581 H3BS24 57 aa4.96□□□□□ -1.62
PRKDC-203ENST00000432581 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
PRKDC-203ENST00000432581 SPRR5A0A1B0GTR4 108 aa4.94□□□□□ -1.62
PRKDC-203ENST00000432581 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
PRKDC-203ENST00000432581 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
PRKDC-203ENST00000432581 K7ERS5 55 aa4.9□□□□□ -1.63
PRKDC-203ENST00000432581 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
PRKDC-203ENST00000432581 KRTAP4-12Q9BQ66 201 aa4.86□□□□□ -1.63
PRKDC-203ENST00000432581 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
PRKDC-203ENST00000432581 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
PRKDC-203ENST00000432581 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
PRKDC-203ENST00000432581 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
PRKDC-203ENST00000432581 ROMO1P60602 79 aa4.69□□□□□ -1.66
PRKDC-203ENST00000432581 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
PRKDC-203ENST00000432581 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
PRKDC-203ENST00000432581 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
PRKDC-203ENST00000432581 KRTAP25-1Q3LHN0 102 aa4.62□□□□□ -1.67
PRKDC-203ENST00000432581 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
PRKDC-203ENST00000432581 KRTAP5-2Q701N4 177 aa4.55□□□□□ -1.68
PRKDC-203ENST00000432581 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
PRKDC-203ENST00000432581 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
PRKDC-203ENST00000432581 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
PRKDC-203ENST00000432581 MT1AP04731 61 aa4.48□□□□□ -1.69
PRKDC-203ENST00000432581 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
PRKDC-203ENST00000432581 KRTAP5-8O75690 187 aa4.46□□□□□ -1.7
PRKDC-203ENST00000432581 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
PRKDC-203ENST00000432581 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
PRKDC-203ENST00000432581 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
PRKDC-203ENST00000432581 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
PRKDC-203ENST00000432581 AHNAKQ09666 5890 aaKnown RBP4.4□□□□□ -1.7
PRKDC-203ENST00000432581 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
PRKDC-203ENST00000432581 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
PRKDC-203ENST00000432581 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
PRKDC-203ENST00000432581 MT3P25713 68 aa4.13□□□□□ -1.75
PRKDC-203ENST00000432581 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
PRKDC-203ENST00000432581 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
PRKDC-203ENST00000432581 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
PRKDC-203ENST00000432581 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
PRKDC-203ENST00000432581 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
PRKDC-203ENST00000432581 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
PRKDC-203ENST00000432581 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
PRKDC-203ENST00000432581 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
PRKDC-203ENST00000432581 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
PRKDC-203ENST00000432581 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
PRKDC-203ENST00000432581 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
PRKDC-203ENST00000432581 INE1O15225 51 aa2.97□□□□□ -1.93
PRKDC-203ENST00000432581 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
PRKDC-203ENST00000432581 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
PRKDC-203ENST00000432581 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
PRKDC-203ENST00000432581 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
PRKDC-203ENST00000432581 PRM1P04553 51 aa2.44□□□□□ -2.02
PRKDC-203ENST00000432581 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
PRKDC-203ENST00000432581 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 76 ms