RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 K7ERS5 55 aa3.6□□□□□ -1.83
CDC42-IT1-201ENST00000431803 KRTAP13-4Q3LI77 160 aa3.59□□□□□ -1.83
CDC42-IT1-201ENST00000431803 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
CDC42-IT1-201ENST00000431803 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
CDC42-IT1-201ENST00000431803 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
CDC42-IT1-201ENST00000431803 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
CDC42-IT1-201ENST00000431803 A6NED7 52 aa3.54□□□□□ -1.84
CDC42-IT1-201ENST00000431803 SPANXA2-OT1Q8N9U9 137 aa3.54□□□□□ -1.84
CDC42-IT1-201ENST00000431803 SNURFQ9Y675 71 aa3.54□□□□□ -1.84
CDC42-IT1-201ENST00000431803 MT1EP04732 61 aa3.52□□□□□ -1.85
CDC42-IT1-201ENST00000431803 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
CDC42-IT1-201ENST00000431803 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
CDC42-IT1-201ENST00000431803 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
CDC42-IT1-201ENST00000431803 SERP2Q8N6R1 65 aa3.44□□□□□ -1.86
CDC42-IT1-201ENST00000431803 A0A0D9SG42 100 aa3.43□□□□□ -1.86
CDC42-IT1-201ENST00000431803 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
CDC42-IT1-201ENST00000431803 COA5Q86WW8 74 aa3.43□□□□□ -1.86
CDC42-IT1-201ENST00000431803 CYSTM1Q9H1C7 97 aa3.42□□□□□ -1.86
CDC42-IT1-201ENST00000431803 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
CDC42-IT1-201ENST00000431803 MT1GP13640 62 aa3.41□□□□□ -1.86
CDC42-IT1-201ENST00000431803 KRTAP19-5Q3LI72 72 aa3.41□□□□□ -1.86
CDC42-IT1-201ENST00000431803 SPATA8Q6RVD6 105 aa3.4□□□□□ -1.87
CDC42-IT1-201ENST00000431803 KRTAP12-1P59990 96 aa3.39□□□□□ -1.87
CDC42-IT1-201ENST00000431803 SERP1Q9Y6X1 66 aa3.39□□□□□ -1.87
CDC42-IT1-201ENST00000431803 SPINT4Q6UDR6 99 aa3.38□□□□□ -1.87
CDC42-IT1-201ENST00000431803 A0A1B0GU33 70 aa3.37□□□□□ -1.87
CDC42-IT1-201ENST00000431803 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
CDC42-IT1-201ENST00000431803 MT1MQ8N339 61 aa3.36□□□□□ -1.87
CDC42-IT1-201ENST00000431803 CCDC179H3BU77 68 aa3.35□□□□□ -1.87
CDC42-IT1-201ENST00000431803 MT1LQ93083 61 aa3.34□□□□□ -1.87
CDC42-IT1-201ENST00000431803 MT4P47944 62 aa3.31□□□□□ -1.88
CDC42-IT1-201ENST00000431803 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
CDC42-IT1-201ENST00000431803 A8MU10 97 aa3.3□□□□□ -1.88
CDC42-IT1-201ENST00000431803 H7BZZ5 65 aa3.3□□□□□ -1.88
CDC42-IT1-201ENST00000431803 TMEM258P61165 79 aa3.3□□□□□ -1.88
CDC42-IT1-201ENST00000431803 COX7CP15954 63 aa3.29□□□□□ -1.88
CDC42-IT1-201ENST00000431803 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
CDC42-IT1-201ENST00000431803 C10orf95Q9H7T3 257 aa3.28□□□□□ -1.88
CDC42-IT1-201ENST00000431803 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
CDC42-IT1-201ENST00000431803 A0A1B0GU69 56 aa3.25□□□□□ -1.89
CDC42-IT1-201ENST00000431803 KRTAP25-1Q3LHN0 102 aa3.24□□□□□ -1.89
CDC42-IT1-201ENST00000431803 TNP1P09430 55 aa3.23□□□□□ -1.89
CDC42-IT1-201ENST00000431803 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
CDC42-IT1-201ENST00000431803 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
CDC42-IT1-201ENST00000431803 ROMO1P60602 79 aa3.19□□□□□ -1.9
CDC42-IT1-201ENST00000431803 KRTAP12-3P60328 96 aa3.15□□□□□ -1.91
CDC42-IT1-201ENST00000431803 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
CDC42-IT1-201ENST00000431803 PRR15LQ9BU68 103 aa3.11□□□□□ -1.91
CDC42-IT1-201ENST00000431803 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
CDC42-IT1-201ENST00000431803 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
CDC42-IT1-201ENST00000431803 SPRR5A0A1B0GTR4 108 aa3.07□□□□□ -1.92
CDC42-IT1-201ENST00000431803 LINC01558Q9Y6Z2 57 aa3.07□□□□□ -1.92
CDC42-IT1-201ENST00000431803 ATP5EP56381 51 aaPredicted RBP3.06□□□□□ -1.92
CDC42-IT1-201ENST00000431803 MIR22HGQ0VDD5 57 aa3.03□□□□□ -1.92
CDC42-IT1-201ENST00000431803 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
CDC42-IT1-201ENST00000431803 UQCR11O14957 56 aa3.01□□□□□ -1.93
CDC42-IT1-201ENST00000431803 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
CDC42-IT1-201ENST00000431803 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
CDC42-IT1-201ENST00000431803 Q1T7F1 81 aa2.92□□□□□ -1.94
CDC42-IT1-201ENST00000431803 CDC42SE1Q9NRR8 79 aa2.85□□□□□ -1.95
CDC42-IT1-201ENST00000431803 MT1AP04731 61 aa2.84□□□□□ -1.95
CDC42-IT1-201ENST00000431803 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
CDC42-IT1-201ENST00000431803 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
CDC42-IT1-201ENST00000431803 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
CDC42-IT1-201ENST00000431803 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
CDC42-IT1-201ENST00000431803 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
CDC42-IT1-201ENST00000431803 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
CDC42-IT1-201ENST00000431803 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
CDC42-IT1-201ENST00000431803 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
CDC42-IT1-201ENST00000431803 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
CDC42-IT1-201ENST00000431803 INE1O15225 51 aa2.64□□□□□ -1.99
CDC42-IT1-201ENST00000431803 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
CDC42-IT1-201ENST00000431803 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
CDC42-IT1-201ENST00000431803 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
CDC42-IT1-201ENST00000431803 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
CDC42-IT1-201ENST00000431803 PRM1P04553 51 aa1.36□□□□□ -2.19
CDC42-IT1-201ENST00000431803 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 50.8 ms