RNA–Protein interactions for RNA: ENST00000430408.1

CNOT10-204, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 3

Gene CNOT10, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-204ENST00000430408 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
CNOT10-204ENST00000430408 R4GN34 69 aa3.22□□□□□ -1.89
CNOT10-204ENST00000430408 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.9
CNOT10-204ENST00000430408 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
CNOT10-204ENST00000430408 M0QZ58 72 aa3.18□□□□□ -1.9
CNOT10-204ENST00000430408 PLAC4Q8WY50 150 aa3.18□□□□□ -1.9
CNOT10-204ENST00000430408 MT1XP80297 61 aa3.14□□□□□ -1.91
CNOT10-204ENST00000430408 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
CNOT10-204ENST00000430408 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
CNOT10-204ENST00000430408 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
CNOT10-204ENST00000430408 KRTAP12-2P59991 146 aa3.09□□□□□ -1.91
CNOT10-204ENST00000430408 INE1O15225 51 aa3.07□□□□□ -1.92
CNOT10-204ENST00000430408 KRTAP13-4Q3LI77 160 aa3.01□□□□□ -1.93
CNOT10-204ENST00000430408 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
CNOT10-204ENST00000430408 KRTAP10-12P60413 245 aa3□□□□□ -1.93
CNOT10-204ENST00000430408 SPRR2FQ96RM1 72 aa2.99□□□□□ -1.93
CNOT10-204ENST00000430408 NEBP20929 6669 aa2.96□□□□□ -1.93
CNOT10-204ENST00000430408 KMT2DO14686 5537 aa2.96□□□□□ -1.94
CNOT10-204ENST00000430408 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.94
CNOT10-204ENST00000430408 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
CNOT10-204ENST00000430408 SPRR2EP22531 72 aa2.93□□□□□ -1.94
CNOT10-204ENST00000430408 SPRR2BP35325 72 aa2.93□□□□□ -1.94
CNOT10-204ENST00000430408 SPRR2AP35326 72 aa2.93□□□□□ -1.94
CNOT10-204ENST00000430408 A0A0D9SG42 100 aa2.92□□□□□ -1.94
CNOT10-204ENST00000430408 KRTAP2-3P0C7H8 128 aa2.9□□□□□ -1.95
CNOT10-204ENST00000430408 KRTAP2-4Q9BYR9 128 aa2.9□□□□□ -1.95
CNOT10-204ENST00000430408 MDN1Q9NU22 5596 aa2.9□□□□□ -1.95
CNOT10-204ENST00000430408 KRTAP12-1P59990 96 aa2.89□□□□□ -1.95
CNOT10-204ENST00000430408 SPRR2DP22532 72 aa2.84□□□□□ -1.95
CNOT10-204ENST00000430408 PP632Q6XCG6 107 aa2.82□□□□□ -1.96
CNOT10-204ENST00000430408 KRTAP2-1Q9BYU5 128 aa2.81□□□□□ -1.96
CNOT10-204ENST00000430408 KRTAP19-7Q3SYF9 63 aa2.8□□□□□ -1.96
CNOT10-204ENST00000430408 C10orf95Q9H7T3 257 aa2.79□□□□□ -1.96
CNOT10-204ENST00000430408 MT1EP04732 61 aa2.78□□□□□ -1.96
CNOT10-204ENST00000430408 TNP1P09430 55 aa2.76□□□□□ -1.97
CNOT10-204ENST00000430408 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
CNOT10-204ENST00000430408 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
CNOT10-204ENST00000430408 MT3P25713 68 aa2.74□□□□□ -1.97
CNOT10-204ENST00000430408 KRTAP4-3Q9BYR4 195 aa2.74□□□□□ -1.97
CNOT10-204ENST00000430408 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
CNOT10-204ENST00000430408 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
CNOT10-204ENST00000430408 MT1GP13640 62 aa2.72□□□□□ -1.97
CNOT10-204ENST00000430408 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
CNOT10-204ENST00000430408 LCE3AQ5TA76 89 aa2.69□□□□□ -1.98
CNOT10-204ENST00000430408 MT1LQ93083 61 aa2.66□□□□□ -1.98
CNOT10-204ENST00000430408 MT1MQ8N339 61 aa2.63□□□□□ -1.99
CNOT10-204ENST00000430408 KRTAP12-3P60328 96 aa2.62□□□□□ -1.99
CNOT10-204ENST00000430408 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
CNOT10-204ENST00000430408 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
CNOT10-204ENST00000430408 MT4P47944 62 aa2.45□□□□□ -2.02
CNOT10-204ENST00000430408 LCE3CQ5T5A8 94 aa2.42□□□□□ -2.02
CNOT10-204ENST00000430408 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
CNOT10-204ENST00000430408 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
CNOT10-204ENST00000430408 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
CNOT10-204ENST00000430408 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
CNOT10-204ENST00000430408 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
CNOT10-204ENST00000430408 KRTAP20-2Q3LI61 65 aa2.34□□□□□ -2.03
CNOT10-204ENST00000430408 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
CNOT10-204ENST00000430408 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
CNOT10-204ENST00000430408 MT1AP04731 61 aa2.28□□□□□ -2.04
CNOT10-204ENST00000430408 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
CNOT10-204ENST00000430408 SYNE1Q8NF91 8797 aaKnown RBP2.24□□□□□ -2.05
CNOT10-204ENST00000430408 KRTAP6-1Q3LI64 71 aa2.23□□□□□ -2.05
CNOT10-204ENST00000430408 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
CNOT10-204ENST00000430408 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
CNOT10-204ENST00000430408 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
CNOT10-204ENST00000430408 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
CNOT10-204ENST00000430408 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
CNOT10-204ENST00000430408 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
CNOT10-204ENST00000430408 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
CNOT10-204ENST00000430408 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
CNOT10-204ENST00000430408 LCE3DQ9BYE3 92 aa1.76□□□□□ -2.13
CNOT10-204ENST00000430408 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
CNOT10-204ENST00000430408 PRM1P04553 51 aa1.63□□□□□ -2.15
CNOT10-204ENST00000430408 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
CNOT10-204ENST00000430408 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
CNOT10-204ENST00000430408 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
CNOT10-204ENST00000430408 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 82.8 ms