RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 MT1EP04732 61 aa6.31□□□□□ -1.4
UBE3D-204ENST00000430071 LCE5AQ5TCM9 118 aa6.29□□□□□ -1.4
UBE3D-204ENST00000430071 LCE3AQ5TA76 89 aa6.26□□□□□ -1.41
UBE3D-204ENST00000430071 KRTAP19-3Q7Z4W3 81 aa6.24□□□□□ -1.41
UBE3D-204ENST00000430071 DSTQ03001 7570 aaKnown RBP6.22□□□□□ -1.41
UBE3D-204ENST00000430071 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
UBE3D-204ENST00000430071 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
UBE3D-204ENST00000430071 ROMO1P60602 79 aa6.1□□□□□ -1.43
UBE3D-204ENST00000430071 KRTAP4-9Q9BYQ8 210 aa6.1□□□□□ -1.43
UBE3D-204ENST00000430071 MT1GP13640 62 aa6.06□□□□□ -1.44
UBE3D-204ENST00000430071 BRK1Q8WUW1 75 aa6.06□□□□□ -1.44
UBE3D-204ENST00000430071 MT1MQ8N339 61 aa6.02□□□□□ -1.45
UBE3D-204ENST00000430071 MT1LQ93083 61 aa6.02□□□□□ -1.45
UBE3D-204ENST00000430071 KRTAP12-3P60328 96 aa6□□□□□ -1.45
UBE3D-204ENST00000430071 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
UBE3D-204ENST00000430071 KRTAP4-3Q9BYR4 195 aa5.96□□□□□ -1.45
UBE3D-204ENST00000430071 PP632Q6XCG6 107 aa5.94□□□□□ -1.46
UBE3D-204ENST00000430071 LCE1DQ5T752 114 aa5.92□□□□□ -1.46
UBE3D-204ENST00000430071 GPR98Q8WXG9 6306 aa5.85□□□□□ -1.47
UBE3D-204ENST00000430071 MT4P47944 62 aa5.84□□□□□ -1.47
UBE3D-204ENST00000430071 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
UBE3D-204ENST00000430071 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
UBE3D-204ENST00000430071 HMCN1Q96RW7 5635 aa5.79□□□□□ -1.48
UBE3D-204ENST00000430071 KRTAP5-4Q6L8H1 288 aa5.76□□□□□ -1.49
UBE3D-204ENST00000430071 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
UBE3D-204ENST00000430071 PMAIP1Q13794 54 aa5.7□□□□□ -1.5
UBE3D-204ENST00000430071 AHNAK2Q8IVF2 5795 aa5.64□□□□□ -1.51
UBE3D-204ENST00000430071 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
UBE3D-204ENST00000430071 PRO0628Q9UI54 55 aa5.61□□□□□ -1.51
UBE3D-204ENST00000430071 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
UBE3D-204ENST00000430071 KRTAP5-10Q6L8G5 202 aa5.52□□□□□ -1.53
UBE3D-204ENST00000430071 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
UBE3D-204ENST00000430071 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
UBE3D-204ENST00000430071 KRTAP20-2Q3LI61 65 aa5.44□□□□□ -1.54
UBE3D-204ENST00000430071 KRTAP4-12Q9BQ66 201 aa5.39□□□□□ -1.55
UBE3D-204ENST00000430071 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
UBE3D-204ENST00000430071 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
UBE3D-204ENST00000430071 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.55
UBE3D-204ENST00000430071 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
UBE3D-204ENST00000430071 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
UBE3D-204ENST00000430071 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
UBE3D-204ENST00000430071 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
UBE3D-204ENST00000430071 KRTAP5-7Q6L8G8 165 aa5.28□□□□□ -1.56
UBE3D-204ENST00000430071 KTN1-AS1Q86SY8 53 aa5.28□□□□□ -1.56
UBE3D-204ENST00000430071 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
UBE3D-204ENST00000430071 MT1AP04731 61 aa5.09□□□□□ -1.59
UBE3D-204ENST00000430071 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
UBE3D-204ENST00000430071 SVIPQ8NHG7 77 aa5.01□□□□□ -1.61
UBE3D-204ENST00000430071 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
UBE3D-204ENST00000430071 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
UBE3D-204ENST00000430071 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
UBE3D-204ENST00000430071 KRTAP5-8O75690 187 aa4.84□□□□□ -1.63
UBE3D-204ENST00000430071 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
UBE3D-204ENST00000430071 MT3P25713 68 aa4.63□□□□□ -1.67
UBE3D-204ENST00000430071 MUC5BQ9HC84 5762 aaPredicted RBP4.62□□□□□ -1.67
UBE3D-204ENST00000430071 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
UBE3D-204ENST00000430071 AHNAKQ09666 5890 aaKnown RBP4.57□□□□□ -1.68
UBE3D-204ENST00000430071 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
UBE3D-204ENST00000430071 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
UBE3D-204ENST00000430071 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
UBE3D-204ENST00000430071 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
UBE3D-204ENST00000430071 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
UBE3D-204ENST00000430071 NDUFAF8A1L188 74 aa4□□□□□ -1.77
UBE3D-204ENST00000430071 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
UBE3D-204ENST00000430071 H3BS24 57 aa3.93□□□□□ -1.78
UBE3D-204ENST00000430071 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
UBE3D-204ENST00000430071 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
UBE3D-204ENST00000430071 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
UBE3D-204ENST00000430071 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
UBE3D-204ENST00000430071 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
UBE3D-204ENST00000430071 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
UBE3D-204ENST00000430071 INE1O15225 51 aa3.28□□□□□ -1.88
UBE3D-204ENST00000430071 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
UBE3D-204ENST00000430071 PRM1P04553 51 aa3.16□□□□□ -1.9
UBE3D-204ENST00000430071 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
UBE3D-204ENST00000430071 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
UBE3D-204ENST00000430071 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
UBE3D-204ENST00000430071 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 88.3 ms