RNA–Protein interactions for RNA: ENST00000428863.6

MDM2-215, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-215ENST00000428863 LINC01558Q9Y6Z2 57 aa5.34□□□□□ -1.55
MDM2-215ENST00000428863 SMIM26A0A096LP01 95 aa5.33□□□□□ -1.56
MDM2-215ENST00000428863 LCE3AQ5TA76 89 aa5.33□□□□□ -1.56
MDM2-215ENST00000428863 C10orf95Q9H7T3 257 aa5.33□□□□□ -1.56
MDM2-215ENST00000428863 KRTAP4-3Q9BYR4 195 aa5.31□□□□□ -1.56
MDM2-215ENST00000428863 GPR98Q8WXG9 6306 aa5.29□□□□□ -1.56
MDM2-215ENST00000428863 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
MDM2-215ENST00000428863 MT4P47944 62 aa5.28□□□□□ -1.56
MDM2-215ENST00000428863 TNP1P09430 55 aa5.25□□□□□ -1.57
MDM2-215ENST00000428863 HMCN1Q96RW7 5635 aa5.22□□□□□ -1.57
MDM2-215ENST00000428863 KRTAP5-4Q6L8H1 288 aa5.22□□□□□ -1.57
MDM2-215ENST00000428863 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
MDM2-215ENST00000428863 PRR15LQ9BU68 103 aa5.21□□□□□ -1.58
MDM2-215ENST00000428863 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
MDM2-215ENST00000428863 PCP4P48539 62 aa5.15□□□□□ -1.59
MDM2-215ENST00000428863 PSPHP1O15172 72 aa5.13□□□□□ -1.59
MDM2-215ENST00000428863 H3BS24 57 aa5.11□□□□□ -1.59
MDM2-215ENST00000428863 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
MDM2-215ENST00000428863 UQCR11O14957 56 aa5.09□□□□□ -1.59
MDM2-215ENST00000428863 AHNAK2Q8IVF2 5795 aa5.08□□□□□ -1.6
MDM2-215ENST00000428863 Q1T7F1 81 aa5.08□□□□□ -1.6
MDM2-215ENST00000428863 MIR22HGQ0VDD5 57 aa5.05□□□□□ -1.6
MDM2-215ENST00000428863 KRTAP5-10Q6L8G5 202 aa5.05□□□□□ -1.6
MDM2-215ENST00000428863 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
MDM2-215ENST00000428863 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
MDM2-215ENST00000428863 V9GYY9 64 aa4.97□□□□□ -1.61
MDM2-215ENST00000428863 RPS28P62857 69 aaKnown RBP4.92□□□□□ -1.62
MDM2-215ENST00000428863 KRTAP20-2Q3LI61 65 aa4.92□□□□□ -1.62
MDM2-215ENST00000428863 A6NED7 52 aa4.88□□□□□ -1.63
MDM2-215ENST00000428863 KRTAP25-1Q3LHN0 102 aa4.88□□□□□ -1.63
MDM2-215ENST00000428863 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
MDM2-215ENST00000428863 KRTAP5-7Q6L8G8 165 aa4.85□□□□□ -1.63
MDM2-215ENST00000428863 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
MDM2-215ENST00000428863 K7ERS5 55 aa4.76□□□□□ -1.65
MDM2-215ENST00000428863 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
MDM2-215ENST00000428863 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
MDM2-215ENST00000428863 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
MDM2-215ENST00000428863 LCE3CQ5T5A8 94 aa4.69□□□□□ -1.66
MDM2-215ENST00000428863 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
MDM2-215ENST00000428863 ROMO1P60602 79 aa4.62□□□□□ -1.67
MDM2-215ENST00000428863 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
MDM2-215ENST00000428863 MT1AP04731 61 aa4.56□□□□□ -1.68
MDM2-215ENST00000428863 KRTAP5-2Q701N4 177 aa4.55□□□□□ -1.68
MDM2-215ENST00000428863 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
MDM2-215ENST00000428863 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
MDM2-215ENST00000428863 BRK1Q8WUW1 75 aa4.39□□□□□ -1.71
MDM2-215ENST00000428863 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
MDM2-215ENST00000428863 MUC5BQ9HC84 5762 aaPredicted RBP4.19□□□□□ -1.74
MDM2-215ENST00000428863 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
MDM2-215ENST00000428863 MT3P25713 68 aa4.16□□□□□ -1.74
MDM2-215ENST00000428863 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
MDM2-215ENST00000428863 AHNAKQ09666 5890 aaKnown RBP4.14□□□□□ -1.75
MDM2-215ENST00000428863 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
MDM2-215ENST00000428863 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
MDM2-215ENST00000428863 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
MDM2-215ENST00000428863 PRO0628Q9UI54 55 aa4.03□□□□□ -1.76
MDM2-215ENST00000428863 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
MDM2-215ENST00000428863 KTN1-AS1Q86SY8 53 aa3.8□□□□□ -1.8
MDM2-215ENST00000428863 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
MDM2-215ENST00000428863 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
MDM2-215ENST00000428863 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
MDM2-215ENST00000428863 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
MDM2-215ENST00000428863 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
MDM2-215ENST00000428863 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
MDM2-215ENST00000428863 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
MDM2-215ENST00000428863 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
MDM2-215ENST00000428863 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
MDM2-215ENST00000428863 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
MDM2-215ENST00000428863 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
MDM2-215ENST00000428863 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
MDM2-215ENST00000428863 A0A0A0MQY5 61 aa2.88□□□□□ -1.95
MDM2-215ENST00000428863 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
MDM2-215ENST00000428863 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
MDM2-215ENST00000428863 PRM1P04553 51 aa2.44□□□□□ -2.02
MDM2-215ENST00000428863 INE1O15225 51 aa2.32□□□□□ -2.04
MDM2-215ENST00000428863 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
MDM2-215ENST00000428863 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 125.3 ms