RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 KRTAP5-9P26371 169 aa4.15□□□□□ -1.74
CECR3-201ENST00000428828 KRTAP19-5Q3LI72 72 aa4.15□□□□□ -1.75
CECR3-201ENST00000428828 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
CECR3-201ENST00000428828 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
CECR3-201ENST00000428828 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.76
CECR3-201ENST00000428828 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.76
CECR3-201ENST00000428828 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.76
CECR3-201ENST00000428828 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
CECR3-201ENST00000428828 MT1EP04732 61 aa4.07□□□□□ -1.76
CECR3-201ENST00000428828 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
CECR3-201ENST00000428828 SPRR2EP22531 72 aa4.04□□□□□ -1.76
CECR3-201ENST00000428828 SPRR2BP35325 72 aa4.04□□□□□ -1.76
CECR3-201ENST00000428828 SPRR2AP35326 72 aa4.04□□□□□ -1.76
CECR3-201ENST00000428828 LCE1AQ5T7P2 110 aa4□□□□□ -1.77
CECR3-201ENST00000428828 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
CECR3-201ENST00000428828 KRTAP19-3Q7Z4W3 81 aa3.95□□□□□ -1.78
CECR3-201ENST00000428828 MT1LQ93083 61 aa3.95□□□□□ -1.78
CECR3-201ENST00000428828 NEBP20929 6669 aa3.94□□□□□ -1.78
CECR3-201ENST00000428828 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.78
CECR3-201ENST00000428828 SPRR2DP22532 72 aa3.89□□□□□ -1.79
CECR3-201ENST00000428828 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
CECR3-201ENST00000428828 MT1GP13640 62 aa3.88□□□□□ -1.79
CECR3-201ENST00000428828 MT1MQ8N339 61 aa3.85□□□□□ -1.79
CECR3-201ENST00000428828 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
CECR3-201ENST00000428828 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
CECR3-201ENST00000428828 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
CECR3-201ENST00000428828 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
CECR3-201ENST00000428828 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
CECR3-201ENST00000428828 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
CECR3-201ENST00000428828 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
CECR3-201ENST00000428828 LOC100996750A0A140TA64 210 aa3.62□□□□□ -1.83
CECR3-201ENST00000428828 KRTAP5-5Q701N2 237 aaPredicted RBP3.47□□□□□ -1.85
CECR3-201ENST00000428828 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
CECR3-201ENST00000428828 MT4P47944 62 aa3.41□□□□□ -1.86
CECR3-201ENST00000428828 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
CECR3-201ENST00000428828 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
CECR3-201ENST00000428828 MT1AP04731 61 aa3.38□□□□□ -1.87
CECR3-201ENST00000428828 LCE1DQ5T752 114 aa3.36□□□□□ -1.87
CECR3-201ENST00000428828 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
CECR3-201ENST00000428828 KRTAP4-6Q9BYQ5 205 aa3.32□□□□□ -1.88
CECR3-201ENST00000428828 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
CECR3-201ENST00000428828 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
CECR3-201ENST00000428828 PRM1P04553 51 aa3.26□□□□□ -1.89
CECR3-201ENST00000428828 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
CECR3-201ENST00000428828 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
CECR3-201ENST00000428828 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
CECR3-201ENST00000428828 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
CECR3-201ENST00000428828 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
CECR3-201ENST00000428828 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
CECR3-201ENST00000428828 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
CECR3-201ENST00000428828 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
CECR3-201ENST00000428828 MT3P25713 68 aa3.05□□□□□ -1.92
CECR3-201ENST00000428828 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
CECR3-201ENST00000428828 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
CECR3-201ENST00000428828 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
CECR3-201ENST00000428828 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
CECR3-201ENST00000428828 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
CECR3-201ENST00000428828 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
CECR3-201ENST00000428828 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
CECR3-201ENST00000428828 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
CECR3-201ENST00000428828 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
CECR3-201ENST00000428828 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
CECR3-201ENST00000428828 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
CECR3-201ENST00000428828 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
CECR3-201ENST00000428828 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
CECR3-201ENST00000428828 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
CECR3-201ENST00000428828 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
CECR3-201ENST00000428828 LCE1FQ5T754 118 aa2.4□□□□□ -2.02
CECR3-201ENST00000428828 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
CECR3-201ENST00000428828 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
CECR3-201ENST00000428828 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
CECR3-201ENST00000428828 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
CECR3-201ENST00000428828 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
CECR3-201ENST00000428828 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
CECR3-201ENST00000428828 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
CECR3-201ENST00000428828 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
CECR3-201ENST00000428828 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 41.4 ms