RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 LCE3CQ5T5A8 94 aa5.71□□□□□ -1.5
TVP23C-203ENST00000428082 KRTAP19-7Q3SYF9 63 aa5.69□□□□□ -1.5
TVP23C-203ENST00000428082 KRTAP5-9P26371 169 aa5.68□□□□□ -1.5
TVP23C-203ENST00000428082 KRTAP6-3Q3LI67 103 aa5.68□□□□□ -1.5
TVP23C-203ENST00000428082 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
TVP23C-203ENST00000428082 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
TVP23C-203ENST00000428082 KRTAP4-12Q9BQ66 201 aa5.67□□□□□ -1.5
TVP23C-203ENST00000428082 KRTAP9-7A8MTY7 169 aa5.66□□□□□ -1.5
TVP23C-203ENST00000428082 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
TVP23C-203ENST00000428082 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
TVP23C-203ENST00000428082 INE1O15225 51 aa5.62□□□□□ -1.51
TVP23C-203ENST00000428082 MT1EP04732 61 aa5.6□□□□□ -1.51
TVP23C-203ENST00000428082 MUC12Q9UKN1 5478 aa5.58□□□□□ -1.52
TVP23C-203ENST00000428082 MDN1Q9NU22 5596 aa5.47□□□□□ -1.53
TVP23C-203ENST00000428082 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
TVP23C-203ENST00000428082 MT1LQ93083 61 aa5.45□□□□□ -1.54
TVP23C-203ENST00000428082 SPRR2EP22531 72 aa5.44□□□□□ -1.54
TVP23C-203ENST00000428082 SPRR2BP35325 72 aa5.44□□□□□ -1.54
TVP23C-203ENST00000428082 SPRR2AP35326 72 aa5.44□□□□□ -1.54
TVP23C-203ENST00000428082 KRTAP19-3Q7Z4W3 81 aa5.42□□□□□ -1.54
TVP23C-203ENST00000428082 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
TVP23C-203ENST00000428082 LCE5AQ5TCM9 118 aa5.36□□□□□ -1.55
TVP23C-203ENST00000428082 KRTAP9-6A8MVA2 160 aa5.36□□□□□ -1.55
TVP23C-203ENST00000428082 MT1GP13640 62 aa5.35□□□□□ -1.55
TVP23C-203ENST00000428082 LCE1DQ5T752 114 aa5.33□□□□□ -1.56
TVP23C-203ENST00000428082 NEBP20929 6669 aa5.31□□□□□ -1.56
TVP23C-203ENST00000428082 MT1MQ8N339 61 aa5.29□□□□□ -1.56
TVP23C-203ENST00000428082 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
TVP23C-203ENST00000428082 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
TVP23C-203ENST00000428082 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
TVP23C-203ENST00000428082 SPRR2DP22532 72 aa5.25□□□□□ -1.57
TVP23C-203ENST00000428082 KRTAP4-3Q9BYR4 195 aa5.21□□□□□ -1.58
TVP23C-203ENST00000428082 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
TVP23C-203ENST00000428082 KRTAP4-2Q9BYR5 136 aa5.17□□□□□ -1.58
TVP23C-203ENST00000428082 DSTQ03001 7570 aaKnown RBP5.13□□□□□ -1.59
TVP23C-203ENST00000428082 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
TVP23C-203ENST00000428082 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
TVP23C-203ENST00000428082 KRTAP4-11Q9BYQ6 195 aa4.99□□□□□ -1.61
TVP23C-203ENST00000428082 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
TVP23C-203ENST00000428082 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
TVP23C-203ENST00000428082 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
TVP23C-203ENST00000428082 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
TVP23C-203ENST00000428082 MT1AP04731 61 aa4.63□□□□□ -1.67
TVP23C-203ENST00000428082 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
TVP23C-203ENST00000428082 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
TVP23C-203ENST00000428082 MT4P47944 62 aa4.57□□□□□ -1.68
TVP23C-203ENST00000428082 SYNE1Q8NF91 8797 aaKnown RBP4.55□□□□□ -1.68
TVP23C-203ENST00000428082 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
TVP23C-203ENST00000428082 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
TVP23C-203ENST00000428082 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
TVP23C-203ENST00000428082 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
TVP23C-203ENST00000428082 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
TVP23C-203ENST00000428082 KRTAP5-2Q701N4 177 aa4.21□□□□□ -1.74
TVP23C-203ENST00000428082 MT3P25713 68 aa4.2□□□□□ -1.74
TVP23C-203ENST00000428082 PRM1P04553 51 aa4.04□□□□□ -1.76
TVP23C-203ENST00000428082 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
TVP23C-203ENST00000428082 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
TVP23C-203ENST00000428082 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
TVP23C-203ENST00000428082 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.8
TVP23C-203ENST00000428082 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
TVP23C-203ENST00000428082 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
TVP23C-203ENST00000428082 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
TVP23C-203ENST00000428082 KRTAP5-7Q6L8G8 165 aa3.64□□□□□ -1.83
TVP23C-203ENST00000428082 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
TVP23C-203ENST00000428082 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
TVP23C-203ENST00000428082 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
TVP23C-203ENST00000428082 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
TVP23C-203ENST00000428082 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
TVP23C-203ENST00000428082 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
TVP23C-203ENST00000428082 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
TVP23C-203ENST00000428082 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
TVP23C-203ENST00000428082 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
TVP23C-203ENST00000428082 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
TVP23C-203ENST00000428082 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
TVP23C-203ENST00000428082 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
TVP23C-203ENST00000428082 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
TVP23C-203ENST00000428082 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 118 ms