RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 SPRR2DP22532 72 aa5.49□□□□□ -1.53
VARS2-203ENST00000428017 KRTAP19-3Q7Z4W3 81 aa5.48□□□□□ -1.53
VARS2-203ENST00000428017 PP632Q6XCG6 107 aa5.47□□□□□ -1.53
VARS2-203ENST00000428017 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
VARS2-203ENST00000428017 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
VARS2-203ENST00000428017 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
VARS2-203ENST00000428017 MT1LQ93083 61 aa5.41□□□□□ -1.54
VARS2-203ENST00000428017 MT1GP13640 62 aa5.4□□□□□ -1.54
VARS2-203ENST00000428017 PMAIP1Q13794 54 aa5.4□□□□□ -1.54
VARS2-203ENST00000428017 PRO0628Q9UI54 55 aa5.32□□□□□ -1.56
VARS2-203ENST00000428017 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
VARS2-203ENST00000428017 MT1MQ8N339 61 aa5.29□□□□□ -1.56
VARS2-203ENST00000428017 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
VARS2-203ENST00000428017 KRTAP2-2Q9BYT5 123 aa5.24□□□□□ -1.57
VARS2-203ENST00000428017 KRTAP2-1Q9BYU5 128 aa5.24□□□□□ -1.57
VARS2-203ENST00000428017 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
VARS2-203ENST00000428017 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
VARS2-203ENST00000428017 KRTAP4-3Q9BYR4 195 aa5.14□□□□□ -1.59
VARS2-203ENST00000428017 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
VARS2-203ENST00000428017 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
VARS2-203ENST00000428017 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
VARS2-203ENST00000428017 DSTQ03001 7570 aaKnown RBP4.98□□□□□ -1.61
VARS2-203ENST00000428017 GPR98Q8WXG9 6306 aa4.92□□□□□ -1.62
VARS2-203ENST00000428017 LCE4AQ5TA78 99 aa4.87□□□□□ -1.63
VARS2-203ENST00000428017 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
VARS2-203ENST00000428017 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
VARS2-203ENST00000428017 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
VARS2-203ENST00000428017 SVIPQ8NHG7 77 aa4.8□□□□□ -1.64
VARS2-203ENST00000428017 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
VARS2-203ENST00000428017 MT4P47944 62 aa4.77□□□□□ -1.65
VARS2-203ENST00000428017 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
VARS2-203ENST00000428017 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
VARS2-203ENST00000428017 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
VARS2-203ENST00000428017 KRTAP4-6Q9BYQ5 205 aa4.63□□□□□ -1.67
VARS2-203ENST00000428017 MT1AP04731 61 aa4.62□□□□□ -1.67
VARS2-203ENST00000428017 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
VARS2-203ENST00000428017 KRTAP6-1Q3LI64 71 aa4.54□□□□□ -1.68
VARS2-203ENST00000428017 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
VARS2-203ENST00000428017 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
VARS2-203ENST00000428017 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
VARS2-203ENST00000428017 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
VARS2-203ENST00000428017 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
VARS2-203ENST00000428017 KRTAP5-10Q6L8G5 202 aa4.41□□□□□ -1.7
VARS2-203ENST00000428017 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
VARS2-203ENST00000428017 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
VARS2-203ENST00000428017 KRTAP5-7Q6L8G8 165 aa4.31□□□□□ -1.72
VARS2-203ENST00000428017 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
VARS2-203ENST00000428017 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
VARS2-203ENST00000428017 MT3P25713 68 aa4.23□□□□□ -1.73
VARS2-203ENST00000428017 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
VARS2-203ENST00000428017 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
VARS2-203ENST00000428017 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
VARS2-203ENST00000428017 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
VARS2-203ENST00000428017 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
VARS2-203ENST00000428017 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
VARS2-203ENST00000428017 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
VARS2-203ENST00000428017 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
VARS2-203ENST00000428017 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
VARS2-203ENST00000428017 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
VARS2-203ENST00000428017 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
VARS2-203ENST00000428017 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
VARS2-203ENST00000428017 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
VARS2-203ENST00000428017 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
VARS2-203ENST00000428017 KRTAP4-2Q9BYR5 136 aa3.49□□□□□ -1.85
VARS2-203ENST00000428017 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
VARS2-203ENST00000428017 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
VARS2-203ENST00000428017 INE1O15225 51 aa3.14□□□□□ -1.91
VARS2-203ENST00000428017 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
VARS2-203ENST00000428017 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
VARS2-203ENST00000428017 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
VARS2-203ENST00000428017 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
VARS2-203ENST00000428017 PRM1P04553 51 aa2.93□□□□□ -1.94
VARS2-203ENST00000428017 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
VARS2-203ENST00000428017 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
VARS2-203ENST00000428017 H3BS24 57 aa2.61□□□□□ -1.99
VARS2-203ENST00000428017 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
VARS2-203ENST00000428017 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
VARS2-203ENST00000428017 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 73.8 ms