RNA–Protein interactions for RNA: ENST00000428012.1

KDM5C-206, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-206ENST00000428012 PP632Q6XCG6 107 aa5□□□□□ -1.61
KDM5C-206ENST00000428012 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
KDM5C-206ENST00000428012 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
KDM5C-206ENST00000428012 MT1LQ93083 61 aa4.97□□□□□ -1.61
KDM5C-206ENST00000428012 SPINT4Q6UDR6 99 aa4.96□□□□□ -1.62
KDM5C-206ENST00000428012 PRR15LQ9BU68 103 aa4.96□□□□□ -1.62
KDM5C-206ENST00000428012 A8MU10 97 aa4.95□□□□□ -1.62
KDM5C-206ENST00000428012 KRTAP12-1P59990 96 aa4.91□□□□□ -1.62
KDM5C-206ENST00000428012 SMIM26A0A096LP01 95 aa4.9□□□□□ -1.63
KDM5C-206ENST00000428012 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.63
KDM5C-206ENST00000428012 PSPHP1O15172 72 aa4.85□□□□□ -1.63
KDM5C-206ENST00000428012 KRTAP20-2Q3LI61 65 aa4.85□□□□□ -1.63
KDM5C-206ENST00000428012 UQCR11O14957 56 aa4.81□□□□□ -1.64
KDM5C-206ENST00000428012 Q1T7F1 81 aa4.8□□□□□ -1.64
KDM5C-206ENST00000428012 V9GYY9 64 aa4.8□□□□□ -1.64
KDM5C-206ENST00000428012 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
KDM5C-206ENST00000428012 MIR22HGQ0VDD5 57 aa4.76□□□□□ -1.65
KDM5C-206ENST00000428012 RPS28P62857 69 aaKnown RBP4.74□□□□□ -1.65
KDM5C-206ENST00000428012 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
KDM5C-206ENST00000428012 KRTAP5-5Q701N2 237 aaPredicted RBP4.71□□□□□ -1.66
KDM5C-206ENST00000428012 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
KDM5C-206ENST00000428012 A6NED7 52 aa4.66□□□□□ -1.66
KDM5C-206ENST00000428012 KRTAP12-4P60329 112 aa4.61□□□□□ -1.67
KDM5C-206ENST00000428012 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
KDM5C-206ENST00000428012 TNP1P09430 55 aa4.59□□□□□ -1.67
KDM5C-206ENST00000428012 K7ERS5 55 aa4.58□□□□□ -1.68
KDM5C-206ENST00000428012 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
KDM5C-206ENST00000428012 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
KDM5C-206ENST00000428012 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
KDM5C-206ENST00000428012 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
KDM5C-206ENST00000428012 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
KDM5C-206ENST00000428012 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
KDM5C-206ENST00000428012 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
KDM5C-206ENST00000428012 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
KDM5C-206ENST00000428012 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
KDM5C-206ENST00000428012 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
KDM5C-206ENST00000428012 ROMO1P60602 79 aa4.35□□□□□ -1.71
KDM5C-206ENST00000428012 BRK1Q8WUW1 75 aa4.28□□□□□ -1.72
KDM5C-206ENST00000428012 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
KDM5C-206ENST00000428012 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
KDM5C-206ENST00000428012 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
KDM5C-206ENST00000428012 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.74
KDM5C-206ENST00000428012 MT1AP04731 61 aa4.2□□□□□ -1.74
KDM5C-206ENST00000428012 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
KDM5C-206ENST00000428012 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
KDM5C-206ENST00000428012 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
KDM5C-206ENST00000428012 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
KDM5C-206ENST00000428012 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
KDM5C-206ENST00000428012 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
KDM5C-206ENST00000428012 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
KDM5C-206ENST00000428012 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
KDM5C-206ENST00000428012 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
KDM5C-206ENST00000428012 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
KDM5C-206ENST00000428012 MT3P25713 68 aa3.83□□□□□ -1.8
KDM5C-206ENST00000428012 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
KDM5C-206ENST00000428012 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
KDM5C-206ENST00000428012 SVIPQ8NHG7 77 aa3.56□□□□□ -1.84
KDM5C-206ENST00000428012 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
KDM5C-206ENST00000428012 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
KDM5C-206ENST00000428012 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
KDM5C-206ENST00000428012 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
KDM5C-206ENST00000428012 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
KDM5C-206ENST00000428012 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
KDM5C-206ENST00000428012 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
KDM5C-206ENST00000428012 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
KDM5C-206ENST00000428012 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
KDM5C-206ENST00000428012 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
KDM5C-206ENST00000428012 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
KDM5C-206ENST00000428012 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
KDM5C-206ENST00000428012 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
KDM5C-206ENST00000428012 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
KDM5C-206ENST00000428012 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
KDM5C-206ENST00000428012 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
KDM5C-206ENST00000428012 A0A0A0MQY5 61 aa2.28□□□□□ -2.04
KDM5C-206ENST00000428012 PRM1P04553 51 aa2.27□□□□□ -2.05
KDM5C-206ENST00000428012 INE1O15225 51 aa2.21□□□□□ -2.06
KDM5C-206ENST00000428012 H3BS24 57 aa1.96□□□□□ -2.1
KDM5C-206ENST00000428012 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms