RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
PSPC1-202ENST00000427943 LCE3AQ5TA76 89 aa6.56□□□□□ -1.36
PSPC1-202ENST00000427943 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
PSPC1-202ENST00000427943 MT1MQ8N339 61 aa6.55□□□□□ -1.36
PSPC1-202ENST00000427943 MT1LQ93083 61 aa6.55□□□□□ -1.36
PSPC1-202ENST00000427943 PRR15LQ9BU68 103 aa6.55□□□□□ -1.36
PSPC1-202ENST00000427943 TNP1P09430 55 aa6.53□□□□□ -1.36
PSPC1-202ENST00000427943 LCE1DQ5T752 114 aa6.45□□□□□ -1.38
PSPC1-202ENST00000427943 A6NED7 52 aa6.44□□□□□ -1.38
PSPC1-202ENST00000427943 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
PSPC1-202ENST00000427943 CDC42SE1Q9NRR8 79 aa6.44□□□□□ -1.38
PSPC1-202ENST00000427943 GPR98Q8WXG9 6306 aa6.44□□□□□ -1.38
PSPC1-202ENST00000427943 LCE4AQ5TA78 99 aa6.39□□□□□ -1.39
PSPC1-202ENST00000427943 MT4P47944 62 aa6.38□□□□□ -1.39
PSPC1-202ENST00000427943 PMAIP1Q13794 54 aa6.37□□□□□ -1.39
PSPC1-202ENST00000427943 HMCN1Q96RW7 5635 aa6.3□□□□□ -1.4
PSPC1-202ENST00000427943 UQCR11O14957 56 aa6.29□□□□□ -1.4
PSPC1-202ENST00000427943 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
PSPC1-202ENST00000427943 KRTAP5-4Q6L8H1 288 aa6.26□□□□□ -1.41
PSPC1-202ENST00000427943 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
PSPC1-202ENST00000427943 KTN1-AS1Q86SY8 53 aa6.24□□□□□ -1.41
PSPC1-202ENST00000427943 KRTAP4-6Q9BYQ5 205 aa6.18□□□□□ -1.42
PSPC1-202ENST00000427943 MIR22HGQ0VDD5 57 aa6.17□□□□□ -1.42
PSPC1-202ENST00000427943 AHNAK2Q8IVF2 5795 aa6.12□□□□□ -1.43
PSPC1-202ENST00000427943 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
PSPC1-202ENST00000427943 K7ERS5 55 aa6.03□□□□□ -1.44
PSPC1-202ENST00000427943 KRTAP5-10Q6L8G5 202 aa6.01□□□□□ -1.45
PSPC1-202ENST00000427943 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
PSPC1-202ENST00000427943 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
PSPC1-202ENST00000427943 KRTAP20-2Q3LI61 65 aa5.94□□□□□ -1.46
PSPC1-202ENST00000427943 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
PSPC1-202ENST00000427943 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
PSPC1-202ENST00000427943 KRTAP12-4P60329 112 aa5.84□□□□□ -1.47
PSPC1-202ENST00000427943 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
PSPC1-202ENST00000427943 PRAC1Q96KF2 57 aa5.83□□□□□ -1.48
PSPC1-202ENST00000427943 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
PSPC1-202ENST00000427943 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
PSPC1-202ENST00000427943 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
PSPC1-202ENST00000427943 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
PSPC1-202ENST00000427943 KRTAP5-7Q6L8G8 165 aa5.77□□□□□ -1.49
PSPC1-202ENST00000427943 ROMO1P60602 79 aa5.67□□□□□ -1.5
PSPC1-202ENST00000427943 MT1AP04731 61 aa5.57□□□□□ -1.52
PSPC1-202ENST00000427943 KRTAP6-1Q3LI64 71 aa5.56□□□□□ -1.52
PSPC1-202ENST00000427943 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
PSPC1-202ENST00000427943 KRTAP5-2Q701N4 177 aa5.48□□□□□ -1.53
PSPC1-202ENST00000427943 KRTAP4-11Q9BYQ6 195 aa5.42□□□□□ -1.54
PSPC1-202ENST00000427943 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
PSPC1-202ENST00000427943 KRTAP6-2Q3LI66 62 aa5.32□□□□□ -1.56
PSPC1-202ENST00000427943 KRTAP5-8O75690 187 aa5.25□□□□□ -1.57
PSPC1-202ENST00000427943 OBSCNQ5VST9 7968 aa5.2□□□□□ -1.58
PSPC1-202ENST00000427943 MT3P25713 68 aa5.07□□□□□ -1.6
PSPC1-202ENST00000427943 MUC5ACP98088 5654 aa5.02□□□□□ -1.61
PSPC1-202ENST00000427943 H3BS24 57 aa5.02□□□□□ -1.61
PSPC1-202ENST00000427943 MUC5BQ9HC84 5762 aaPredicted RBP5.01□□□□□ -1.61
PSPC1-202ENST00000427943 AHNAKQ09666 5890 aaKnown RBP4.99□□□□□ -1.61
PSPC1-202ENST00000427943 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
PSPC1-202ENST00000427943 KRTAP5-1Q6L8H4 278 aa4.93□□□□□ -1.62
PSPC1-202ENST00000427943 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
PSPC1-202ENST00000427943 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
PSPC1-202ENST00000427943 LCE1EQ5T753 118 aa4.65□□□□□ -1.67
PSPC1-202ENST00000427943 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
PSPC1-202ENST00000427943 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
PSPC1-202ENST00000427943 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
PSPC1-202ENST00000427943 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
PSPC1-202ENST00000427943 INE1O15225 51 aa4.16□□□□□ -1.74
PSPC1-202ENST00000427943 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
PSPC1-202ENST00000427943 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
PSPC1-202ENST00000427943 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
PSPC1-202ENST00000427943 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
PSPC1-202ENST00000427943 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
PSPC1-202ENST00000427943 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
PSPC1-202ENST00000427943 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
PSPC1-202ENST00000427943 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
PSPC1-202ENST00000427943 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
PSPC1-202ENST00000427943 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
PSPC1-202ENST00000427943 PRM1P04553 51 aa2.95□□□□□ -1.94
PSPC1-202ENST00000427943 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
PSPC1-202ENST00000427943 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 68.5 ms