RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 SPRR2FQ96RM1 72 aa6.2□□□□□ -1.42
CHEK1-202ENST00000427383 KRTAP9-9Q9BYP9 154 aa6.18□□□□□ -1.42
CHEK1-202ENST00000427383 KRTAP9-4Q9BYQ2 154 aa6.18□□□□□ -1.42
CHEK1-202ENST00000427383 MDN1Q9NU22 5596 aa6.15□□□□□ -1.42
CHEK1-202ENST00000427383 KRTAP6-3Q3LI67 103 aa6.14□□□□□ -1.43
CHEK1-202ENST00000427383 MT1LQ93083 61 aa6.12□□□□□ -1.43
CHEK1-202ENST00000427383 KRTAP19-3Q7Z4W3 81 aa6.04□□□□□ -1.44
CHEK1-202ENST00000427383 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
CHEK1-202ENST00000427383 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
CHEK1-202ENST00000427383 LCE1AQ5T7P2 110 aa5.98□□□□□ -1.45
CHEK1-202ENST00000427383 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
CHEK1-202ENST00000427383 MT1GP13640 62 aa5.95□□□□□ -1.46
CHEK1-202ENST00000427383 LCE3CQ5T5A8 94 aa5.95□□□□□ -1.46
CHEK1-202ENST00000427383 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
CHEK1-202ENST00000427383 MT1MQ8N339 61 aa5.91□□□□□ -1.46
CHEK1-202ENST00000427383 SPRR2EP22531 72 aa5.9□□□□□ -1.47
CHEK1-202ENST00000427383 SPRR2BP35325 72 aa5.9□□□□□ -1.47
CHEK1-202ENST00000427383 SPRR2AP35326 72 aa5.9□□□□□ -1.47
CHEK1-202ENST00000427383 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
CHEK1-202ENST00000427383 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
CHEK1-202ENST00000427383 NEBP20929 6669 aa5.81□□□□□ -1.48
CHEK1-202ENST00000427383 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
CHEK1-202ENST00000427383 KRTAP4-9Q9BYQ8 210 aa5.76□□□□□ -1.49
CHEK1-202ENST00000427383 DSTQ03001 7570 aaKnown RBP5.72□□□□□ -1.49
CHEK1-202ENST00000427383 SPRR2DP22532 72 aa5.69□□□□□ -1.5
CHEK1-202ENST00000427383 KRTAP9-6A8MVA2 160 aa5.67□□□□□ -1.5
CHEK1-202ENST00000427383 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
CHEK1-202ENST00000427383 KRTAP4-2Q9BYR5 136 aa5.63□□□□□ -1.51
CHEK1-202ENST00000427383 KRTAP4-11Q9BYQ6 195 aa5.54□□□□□ -1.52
CHEK1-202ENST00000427383 H3BS24 57 aa5.51□□□□□ -1.53
CHEK1-202ENST00000427383 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
CHEK1-202ENST00000427383 KRTAP5-5Q701N2 237 aaPredicted RBP5.38□□□□□ -1.55
CHEK1-202ENST00000427383 KRTAP2-3P0C7H8 128 aa5.35□□□□□ -1.55
CHEK1-202ENST00000427383 KRTAP2-4Q9BYR9 128 aa5.35□□□□□ -1.55
CHEK1-202ENST00000427383 NDUFAF8A1L188 74 aa5.31□□□□□ -1.56
CHEK1-202ENST00000427383 KRTAP20-1Q3LI63 56 aa5.29□□□□□ -1.56
CHEK1-202ENST00000427383 KRTAP2-2Q9BYT5 123 aa5.24□□□□□ -1.57
CHEK1-202ENST00000427383 KRTAP2-1Q9BYU5 128 aa5.24□□□□□ -1.57
CHEK1-202ENST00000427383 MT1AP04731 61 aa5.19□□□□□ -1.58
CHEK1-202ENST00000427383 KRTAP5-4Q6L8H1 288 aa5.18□□□□□ -1.58
CHEK1-202ENST00000427383 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.58
CHEK1-202ENST00000427383 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
CHEK1-202ENST00000427383 KRTAP5-3Q6L8H2 238 aa5.02□□□□□ -1.61
CHEK1-202ENST00000427383 HMCN1Q96RW7 5635 aa4.96□□□□□ -1.61
CHEK1-202ENST00000427383 KRTAP12-4P60329 112 aa4.94□□□□□ -1.62
CHEK1-202ENST00000427383 MT4P47944 62 aa4.93□□□□□ -1.62
CHEK1-202ENST00000427383 KRTAP20-2Q3LI61 65 aa4.83□□□□□ -1.64
CHEK1-202ENST00000427383 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
CHEK1-202ENST00000427383 KRTAP5-2Q701N4 177 aa4.7□□□□□ -1.66
CHEK1-202ENST00000427383 MT3P25713 68 aa4.69□□□□□ -1.66
CHEK1-202ENST00000427383 A0A0A0MQY5 61 aa4.57□□□□□ -1.68
CHEK1-202ENST00000427383 LCE3DQ9BYE3 92 aa4.43□□□□□ -1.7
CHEK1-202ENST00000427383 AHNAK2Q8IVF2 5795 aa4.43□□□□□ -1.7
CHEK1-202ENST00000427383 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
CHEK1-202ENST00000427383 INE1O15225 51 aa4.36□□□□□ -1.71
CHEK1-202ENST00000427383 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
CHEK1-202ENST00000427383 KRTAP5-10Q6L8G5 202 aa4.16□□□□□ -1.74
CHEK1-202ENST00000427383 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
CHEK1-202ENST00000427383 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
CHEK1-202ENST00000427383 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
CHEK1-202ENST00000427383 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
CHEK1-202ENST00000427383 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
CHEK1-202ENST00000427383 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
CHEK1-202ENST00000427383 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
CHEK1-202ENST00000427383 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
CHEK1-202ENST00000427383 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
CHEK1-202ENST00000427383 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.81
CHEK1-202ENST00000427383 PRM1P04553 51 aa3.69□□□□□ -1.82
CHEK1-202ENST00000427383 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.84
CHEK1-202ENST00000427383 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.86
CHEK1-202ENST00000427383 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
CHEK1-202ENST00000427383 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
CHEK1-202ENST00000427383 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
CHEK1-202ENST00000427383 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
CHEK1-202ENST00000427383 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
CHEK1-202ENST00000427383 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
CHEK1-202ENST00000427383 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 64.6 ms