RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 KRTAP4-11Q9BYQ6 195 aa6.11□□□□□ -1.43
COL11A1-204ENST00000427239 TNP1P09430 55 aa6.06□□□□□ -1.44
COL11A1-204ENST00000427239 SYNE2Q8WXH0 6885 aaKnown RBP6.06□□□□□ -1.44
COL11A1-204ENST00000427239 KMT2DO14686 5537 aa6.04□□□□□ -1.44
COL11A1-204ENST00000427239 KRTAP6-3Q3LI67 103 aa5.99□□□□□ -1.45
COL11A1-204ENST00000427239 KRTAP8-1Q8IUC2 63 aa5.98□□□□□ -1.45
COL11A1-204ENST00000427239 KRTAP5-9P26371 169 aa5.92□□□□□ -1.46
COL11A1-204ENST00000427239 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
COL11A1-204ENST00000427239 SPRR2FQ96RM1 72 aa5.85□□□□□ -1.47
COL11A1-204ENST00000427239 LCE3AQ5TA76 89 aa5.82□□□□□ -1.48
COL11A1-204ENST00000427239 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
COL11A1-204ENST00000427239 LUZP6Q538Z0 58 aa5.77□□□□□ -1.49
COL11A1-204ENST00000427239 MUC12Q9UKN1 5478 aa5.77□□□□□ -1.49
COL11A1-204ENST00000427239 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
COL11A1-204ENST00000427239 MDN1Q9NU22 5596 aa5.73□□□□□ -1.49
COL11A1-204ENST00000427239 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
COL11A1-204ENST00000427239 A0A0A0MQY5 61 aa5.7□□□□□ -1.5
COL11A1-204ENST00000427239 MT1EP04732 61 aa5.67□□□□□ -1.5
COL11A1-204ENST00000427239 SPRR2EP22531 72 aa5.63□□□□□ -1.51
COL11A1-204ENST00000427239 SPRR2BP35325 72 aa5.63□□□□□ -1.51
COL11A1-204ENST00000427239 SPRR2AP35326 72 aa5.63□□□□□ -1.51
COL11A1-204ENST00000427239 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
COL11A1-204ENST00000427239 LCE1AQ5T7P2 110 aa5.63□□□□□ -1.51
COL11A1-204ENST00000427239 NEBP20929 6669 aa5.58□□□□□ -1.52
COL11A1-204ENST00000427239 KRTAP19-3Q7Z4W3 81 aa5.54□□□□□ -1.52
COL11A1-204ENST00000427239 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
COL11A1-204ENST00000427239 MT1LQ93083 61 aa5.5□□□□□ -1.53
COL11A1-204ENST00000427239 MT1GP13640 62 aa5.49□□□□□ -1.53
COL11A1-204ENST00000427239 SPRR2DP22532 72 aa5.45□□□□□ -1.54
COL11A1-204ENST00000427239 KRTAP5-3Q6L8H2 238 aa5.36□□□□□ -1.55
COL11A1-204ENST00000427239 MT1MQ8N339 61 aa5.36□□□□□ -1.55
COL11A1-204ENST00000427239 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
COL11A1-204ENST00000427239 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
COL11A1-204ENST00000427239 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
COL11A1-204ENST00000427239 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
COL11A1-204ENST00000427239 DSTQ03001 7570 aaKnown RBP5.23□□□□□ -1.57
COL11A1-204ENST00000427239 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
COL11A1-204ENST00000427239 KRTAP2-2Q9BYT5 123 aa5.2□□□□□ -1.58
COL11A1-204ENST00000427239 KRTAP2-1Q9BYU5 128 aa5.2□□□□□ -1.58
COL11A1-204ENST00000427239 INE1O15225 51 aa5.15□□□□□ -1.58
COL11A1-204ENST00000427239 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
COL11A1-204ENST00000427239 KRTAP5-5Q701N2 237 aaPredicted RBP4.88□□□□□ -1.63
COL11A1-204ENST00000427239 KRTAP5-4Q6L8H1 288 aa4.86□□□□□ -1.63
COL11A1-204ENST00000427239 MT4P47944 62 aa4.72□□□□□ -1.65
COL11A1-204ENST00000427239 MT1AP04731 61 aa4.69□□□□□ -1.66
COL11A1-204ENST00000427239 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
COL11A1-204ENST00000427239 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
COL11A1-204ENST00000427239 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
COL11A1-204ENST00000427239 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
COL11A1-204ENST00000427239 KRTAP20-2Q3LI61 65 aa4.54□□□□□ -1.68
COL11A1-204ENST00000427239 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
COL11A1-204ENST00000427239 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
COL11A1-204ENST00000427239 MT3P25713 68 aa4.29□□□□□ -1.72
COL11A1-204ENST00000427239 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
COL11A1-204ENST00000427239 GPR98Q8WXG9 6306 aa4.15□□□□□ -1.74
COL11A1-204ENST00000427239 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
COL11A1-204ENST00000427239 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.76
COL11A1-204ENST00000427239 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
COL11A1-204ENST00000427239 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
COL11A1-204ENST00000427239 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
COL11A1-204ENST00000427239 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
COL11A1-204ENST00000427239 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
COL11A1-204ENST00000427239 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
COL11A1-204ENST00000427239 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
COL11A1-204ENST00000427239 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
COL11A1-204ENST00000427239 MUC5ACP98088 5654 aa3.65□□□□□ -1.82
COL11A1-204ENST00000427239 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
COL11A1-204ENST00000427239 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
COL11A1-204ENST00000427239 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
COL11A1-204ENST00000427239 PRM1P04553 51 aa3.53□□□□□ -1.84
COL11A1-204ENST00000427239 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
COL11A1-204ENST00000427239 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
COL11A1-204ENST00000427239 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
COL11A1-204ENST00000427239 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
COL11A1-204ENST00000427239 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
COL11A1-204ENST00000427239 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
COL11A1-204ENST00000427239 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
COL11A1-204ENST00000427239 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 79.9 ms