RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 H1FX-AS1Q4G0G2 97 aa2.59□□□□□ -1.99
C9orf3-205ENST00000427193 MDN1Q9NU22 5596 aa2.58□□□□□ -2
C9orf3-205ENST00000427193 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
C9orf3-205ENST00000427193 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
C9orf3-205ENST00000427193 Q1T7F1 81 aa2.56□□□□□ -2
C9orf3-205ENST00000427193 ROMO1P60602 79 aa2.55□□□□□ -2
C9orf3-205ENST00000427193 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
C9orf3-205ENST00000427193 MT2AP02795 61 aa2.51□□□□□ -2.01
C9orf3-205ENST00000427193 ACYP2P14621 99 aa2.51□□□□□ -2.01
C9orf3-205ENST00000427193 KRTAP2-3P0C7H8 128 aa2.5□□□□□ -2.01
C9orf3-205ENST00000427193 SPTSSBQ8NFR3 76 aa2.5□□□□□ -2.01
C9orf3-205ENST00000427193 KRTAP2-4Q9BYR9 128 aa2.5□□□□□ -2.01
C9orf3-205ENST00000427193 S4R3F8 94 aa2.5□□□□□ -2.01
C9orf3-205ENST00000427193 H0YAA0 97 aa2.49□□□□□ -2.01
C9orf3-205ENST00000427193 MT1FP04733 61 aa2.49□□□□□ -2.01
C9orf3-205ENST00000427193 CSAG1Q6PB30 78 aa2.49□□□□□ -2.01
C9orf3-205ENST00000427193 COA5Q86WW8 74 aa2.49□□□□□ -2.01
C9orf3-205ENST00000427193 CDC42SE1Q9NRR8 79 aa2.46□□□□□ -2.02
C9orf3-205ENST00000427193 MIR22HGQ0VDD5 57 aa2.44□□□□□ -2.02
C9orf3-205ENST00000427193 A0A1B0GU33 70 aa2.42□□□□□ -2.02
C9orf3-205ENST00000427193 P0C880 135 aa2.42□□□□□ -2.02
C9orf3-205ENST00000427193 Q5VV11 94 aa2.41□□□□□ -2.02
C9orf3-205ENST00000427193 SPRR2GQ9BYE4 73 aa2.41□□□□□ -2.02
C9orf3-205ENST00000427193 CHKB-CPT1BH3BT56 60 aa2.4□□□□□ -2.03
C9orf3-205ENST00000427193 KRTAP2-1Q9BYU5 128 aa2.4□□□□□ -2.03
C9orf3-205ENST00000427193 CRIPTQ9P021 101 aa2.39□□□□□ -2.03
C9orf3-205ENST00000427193 LINC01558Q9Y6Z2 57 aa2.39□□□□□ -2.03
C9orf3-205ENST00000427193 KRTAP19-8Q3LI54 63 aa2.38□□□□□ -2.03
C9orf3-205ENST00000427193 KRTAP25-1Q3LHN0 102 aa2.37□□□□□ -2.03
C9orf3-205ENST00000427193 KRTAP13-4Q3LI77 160 aa2.35□□□□□ -2.03
C9orf3-205ENST00000427193 MT1BP07438 61 aa2.34□□□□□ -2.03
C9orf3-205ENST00000427193 M0QZ58 72 aa2.33□□□□□ -2.04
C9orf3-205ENST00000427193 PRR15LQ9BU68 103 aa2.33□□□□□ -2.04
C9orf3-205ENST00000427193 A0A1B0GU69 56 aa2.31□□□□□ -2.04
C9orf3-205ENST00000427193 R4GN34 69 aa2.3□□□□□ -2.04
C9orf3-205ENST00000427193 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
C9orf3-205ENST00000427193 SPRR2EP22531 72 aa2.28□□□□□ -2.04
C9orf3-205ENST00000427193 SPRR2BP35325 72 aa2.28□□□□□ -2.04
C9orf3-205ENST00000427193 SPRR2AP35326 72 aa2.28□□□□□ -2.04
C9orf3-205ENST00000427193 SPATA8Q6RVD6 105 aa2.28□□□□□ -2.04
C9orf3-205ENST00000427193 SPINT4Q6UDR6 99 aa2.28□□□□□ -2.04
C9orf3-205ENST00000427193 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.04
C9orf3-205ENST00000427193 UQCR11O14957 56 aa2.25□□□□□ -2.05
C9orf3-205ENST00000427193 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
C9orf3-205ENST00000427193 KRTAP12-1P59990 96 aa2.24□□□□□ -2.05
C9orf3-205ENST00000427193 MT1XP80297 61 aa2.24□□□□□ -2.05
C9orf3-205ENST00000427193 SPRR2FQ96RM1 72 aa2.23□□□□□ -2.05
C9orf3-205ENST00000427193 SPRR2DP22532 72 aa2.22□□□□□ -2.05
C9orf3-205ENST00000427193 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
C9orf3-205ENST00000427193 A0A0D9SG42 100 aa2.19□□□□□ -2.06
C9orf3-205ENST00000427193 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
C9orf3-205ENST00000427193 PLAC4Q8WY50 150 aa2.18□□□□□ -2.06
C9orf3-205ENST00000427193 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
C9orf3-205ENST00000427193 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
C9orf3-205ENST00000427193 C10orf95Q9H7T3 257 aa2.13□□□□□ -2.07
C9orf3-205ENST00000427193 KRTAP8-1Q8IUC2 63 aa2.1□□□□□ -2.07
C9orf3-205ENST00000427193 INE1O15225 51 aa2.07□□□□□ -2.08
C9orf3-205ENST00000427193 TNP1P09430 55 aa2.03□□□□□ -2.08
C9orf3-205ENST00000427193 KRTAP19-7Q3SYF9 63 aa2.01□□□□□ -2.09
C9orf3-205ENST00000427193 MT4P47944 62 aa1.97□□□□□ -2.09
C9orf3-205ENST00000427193 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
C9orf3-205ENST00000427193 MT1EP04732 61 aa1.96□□□□□ -2.1
C9orf3-205ENST00000427193 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
C9orf3-205ENST00000427193 MT1LQ93083 61 aa1.9□□□□□ -2.11
C9orf3-205ENST00000427193 KRTAP19-3Q7Z4W3 81 aa1.89□□□□□ -2.11
C9orf3-205ENST00000427193 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
C9orf3-205ENST00000427193 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
C9orf3-205ENST00000427193 MT1GP13640 62 aa1.87□□□□□ -2.11
C9orf3-205ENST00000427193 MT1MQ8N339 61 aa1.84□□□□□ -2.11
C9orf3-205ENST00000427193 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
C9orf3-205ENST00000427193 SYNE1Q8NF91 8797 aaKnown RBP1.64□□□□□ -2.15
C9orf3-205ENST00000427193 MT1AP04731 61 aa1.61□□□□□ -2.15
C9orf3-205ENST00000427193 KRTAP6-1Q3LI64 71 aa1.59□□□□□ -2.15
C9orf3-205ENST00000427193 KRTAP6-2Q3LI66 62 aa1.47□□□□□ -2.17
C9orf3-205ENST00000427193 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
C9orf3-205ENST00000427193 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
C9orf3-205ENST00000427193 PRM1P04553 51 aa1.04□□□□□ -2.24
C9orf3-205ENST00000427193 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 49.1 ms