RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 KRTAP2-1Q9BYU5 128 aa8.54□□□□□ -1.04
PDGFA-205ENST00000426681 LCE3BQ5TA77 95 aa8.49□□□□□ -1.05
PDGFA-205ENST00000426681 KRTAP25-1Q3LHN0 102 aa8.47□□□□□ -1.05
PDGFA-205ENST00000426681 MT1GP13640 62 aa8.44□□□□□ -1.06
PDGFA-205ENST00000426681 MT1LQ93083 61 aa8.38□□□□□ -1.07
PDGFA-205ENST00000426681 PP632Q6XCG6 107 aa8.34□□□□□ -1.07
PDGFA-205ENST00000426681 KRTAP12-3P60328 96 aa8.32□□□□□ -1.08
PDGFA-205ENST00000426681 CDC42SE1Q9NRR8 79 aa8.29□□□□□ -1.08
PDGFA-205ENST00000426681 MT1MQ8N339 61 aa8.27□□□□□ -1.09
PDGFA-205ENST00000426681 KRTAP23-1A1A580 65 aa8.21□□□□□ -1.1
PDGFA-205ENST00000426681 DSTQ03001 7570 aaKnown RBP8.18□□□□□ -1.1
PDGFA-205ENST00000426681 ROMO1P60602 79 aa8.14□□□□□ -1.11
PDGFA-205ENST00000426681 KRTAP4-3Q9BYR4 195 aa8.04□□□□□ -1.12
PDGFA-205ENST00000426681 KRTAP4-7Q9BYR0 210 aa7.96□□□□□ -1.14
PDGFA-205ENST00000426681 KRTAP19-4Q3LI73 84 aa7.94□□□□□ -1.14
PDGFA-205ENST00000426681 KRTAP15-1Q3LI76 137 aa7.88□□□□□ -1.15
PDGFA-205ENST00000426681 LCE4AQ5TA78 99 aa7.79□□□□□ -1.16
PDGFA-205ENST00000426681 KRTAP4-9Q9BYQ8 210 aa7.79□□□□□ -1.16
PDGFA-205ENST00000426681 KRTAP5-4Q6L8H1 288 aa7.73□□□□□ -1.17
PDGFA-205ENST00000426681 BRK1Q8WUW1 75 aa7.72□□□□□ -1.17
PDGFA-205ENST00000426681 LCE3CQ5T5A8 94 aa7.7□□□□□ -1.18
PDGFA-205ENST00000426681 LCE1DQ5T752 114 aa7.67□□□□□ -1.18
PDGFA-205ENST00000426681 MT4P47944 62 aa7.61□□□□□ -1.19
PDGFA-205ENST00000426681 KRTAP5-5Q701N2 237 aaPredicted RBP7.58□□□□□ -1.2
PDGFA-205ENST00000426681 LOC100996750A0A140TA64 210 aa7.53□□□□□ -1.2
PDGFA-205ENST00000426681 HMCN1Q96RW7 5635 aa7.51□□□□□ -1.21
PDGFA-205ENST00000426681 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.22
PDGFA-205ENST00000426681 PMAIP1Q13794 54 aa7.29□□□□□ -1.24
PDGFA-205ENST00000426681 GPR98Q8WXG9 6306 aa7.29□□□□□ -1.24
PDGFA-205ENST00000426681 SPRR5A0A1B0GTR4 108 aa7.28□□□□□ -1.24
PDGFA-205ENST00000426681 KRTAP12-4P60329 112 aa7.28□□□□□ -1.24
PDGFA-205ENST00000426681 KRTAP9-6A8MVA2 160 aa7.25□□□□□ -1.25
PDGFA-205ENST00000426681 KRTAP20-2Q3LI61 65 aa7.24□□□□□ -1.25
PDGFA-205ENST00000426681 SYNE1Q8NF91 8797 aaKnown RBP7.16□□□□□ -1.26
PDGFA-205ENST00000426681 MT1AP04731 61 aa7.15□□□□□ -1.26
PDGFA-205ENST00000426681 AHNAK2Q8IVF2 5795 aa7.11□□□□□ -1.27
PDGFA-205ENST00000426681 KRTAP6-1Q3LI64 71 aa7.07□□□□□ -1.28
PDGFA-205ENST00000426681 KRTAP5-3Q6L8H2 238 aa7.03□□□□□ -1.28
PDGFA-205ENST00000426681 PRO0628Q9UI54 55 aa7.02□□□□□ -1.29
PDGFA-205ENST00000426681 KRTAP5-10Q6L8G5 202 aa6.98□□□□□ -1.29
PDGFA-205ENST00000426681 PRAC1Q96KF2 57 aa6.92□□□□□ -1.3
PDGFA-205ENST00000426681 KRTAP9-4Q9BYQ2 154 aa6.88□□□□□ -1.31
PDGFA-205ENST00000426681 KRTAP5-2Q701N4 177 aa6.83□□□□□ -1.32
PDGFA-205ENST00000426681 KRTAP6-2Q3LI66 62 aa6.69□□□□□ -1.34
PDGFA-205ENST00000426681 KRTAP5-7Q6L8G8 165 aa6.67□□□□□ -1.34
PDGFA-205ENST00000426681 KTN1-AS1Q86SY8 53 aa6.63□□□□□ -1.35
PDGFA-205ENST00000426681 KRTAP4-11Q9BYQ6 195 aa6.54□□□□□ -1.36
PDGFA-205ENST00000426681 MT3P25713 68 aa6.52□□□□□ -1.37
PDGFA-205ENST00000426681 KRTAP5-8O75690 187 aa6.32□□□□□ -1.4
PDGFA-205ENST00000426681 SVIPQ8NHG7 77 aa6.27□□□□□ -1.41
PDGFA-205ENST00000426681 OBSCNQ5VST9 7968 aa6.2□□□□□ -1.42
PDGFA-205ENST00000426681 KRTAP5-1Q6L8H4 278 aa6.05□□□□□ -1.44
PDGFA-205ENST00000426681 LCE1EQ5T753 118 aa5.95□□□□□ -1.46
PDGFA-205ENST00000426681 KRTAP9-9Q9BYP9 154 aa5.91□□□□□ -1.46
PDGFA-205ENST00000426681 MUC5ACP98088 5654 aa5.85□□□□□ -1.47
PDGFA-205ENST00000426681 LUZP6Q538Z0 58 aa5.82□□□□□ -1.48
PDGFA-205ENST00000426681 MUC5BQ9HC84 5762 aaPredicted RBP5.79□□□□□ -1.48
PDGFA-205ENST00000426681 AHNAKQ09666 5890 aaKnown RBP5.76□□□□□ -1.49
PDGFA-205ENST00000426681 LCE3DQ9BYE3 92 aa5.61□□□□□ -1.51
PDGFA-205ENST00000426681 KRTAP4-2Q9BYR5 136 aa5.56□□□□□ -1.52
PDGFA-205ENST00000426681 LCE1CQ5T751 118 aa5.51□□□□□ -1.53
PDGFA-205ENST00000426681 LCE1BQ5T7P3 118 aa5.51□□□□□ -1.53
PDGFA-205ENST00000426681 LCE3EQ5T5B0 92 aa5.33□□□□□ -1.56
PDGFA-205ENST00000426681 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.07□□□□□ -1.6
PDGFA-205ENST00000426681 KRTAP5-11Q6L8G4 156 aa4.95□□□□□ -1.62
PDGFA-205ENST00000426681 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
PDGFA-205ENST00000426681 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
PDGFA-205ENST00000426681 LCE1FQ5T754 118 aa4.76□□□□□ -1.65
PDGFA-205ENST00000426681 KRTAP21-2Q3LI59 83 aa4.67□□□□□ -1.66
PDGFA-205ENST00000426681 PHGR1C9JFL3 82 aa4.27□□□□□ -1.73
PDGFA-205ENST00000426681 KRTAP4-4Q9BYR3 166 aa4.18□□□□□ -1.74
PDGFA-205ENST00000426681 PRM1P04553 51 aa4.16□□□□□ -1.74
PDGFA-205ENST00000426681 INE1O15225 51 aa4.04□□□□□ -1.76
PDGFA-205ENST00000426681 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
PDGFA-205ENST00000426681 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
PDGFA-205ENST00000426681 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
PDGFA-205ENST00000426681 MUC16Q8WXI7 14507 aa2.78□□□□□ -1.96
PDGFA-205ENST00000426681 H3BS24 57 aa2.41□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 145.9 ms