RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 KRTAP13-4Q3LI77 160 aa5.2□□□□□ -1.58
PDAP1-202ENST00000426447 V9GYY9 64 aa5.2□□□□□ -1.58
PDAP1-202ENST00000426447 A0A1B0GU69 56 aa5.19□□□□□ -1.58
PDAP1-202ENST00000426447 KRTAP5-3Q6L8H2 238 aa5.17□□□□□ -1.58
PDAP1-202ENST00000426447 PRR15LQ9BU68 103 aa5.16□□□□□ -1.58
PDAP1-202ENST00000426447 MT1LQ93083 61 aa5.15□□□□□ -1.59
PDAP1-202ENST00000426447 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.59
PDAP1-202ENST00000426447 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
PDAP1-202ENST00000426447 A0A1B0GU33 70 aa5.1□□□□□ -1.59
PDAP1-202ENST00000426447 PSPHP1O15172 72 aa5.09□□□□□ -1.59
PDAP1-202ENST00000426447 SPINT4Q6UDR6 99 aa5.04□□□□□ -1.6
PDAP1-202ENST00000426447 UQCR11O14957 56 aa5.01□□□□□ -1.61
PDAP1-202ENST00000426447 SPATA8Q6RVD6 105 aa5.01□□□□□ -1.61
PDAP1-202ENST00000426447 KRTAP20-2Q3LI61 65 aa4.99□□□□□ -1.61
PDAP1-202ENST00000426447 C10orf95Q9H7T3 257 aa4.97□□□□□ -1.61
PDAP1-202ENST00000426447 A6NED7 52 aa4.94□□□□□ -1.62
PDAP1-202ENST00000426447 MIR22HGQ0VDD5 57 aa4.93□□□□□ -1.62
PDAP1-202ENST00000426447 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
PDAP1-202ENST00000426447 A8MU10 97 aa4.91□□□□□ -1.62
PDAP1-202ENST00000426447 KRTAP4-7Q9BYR0 210 aa4.9□□□□□ -1.63
PDAP1-202ENST00000426447 KRTAP12-1P59990 96 aa4.88□□□□□ -1.63
PDAP1-202ENST00000426447 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
PDAP1-202ENST00000426447 CDC42SE1Q9NRR8 79 aa4.84□□□□□ -1.63
PDAP1-202ENST00000426447 TNP1P09430 55 aa4.83□□□□□ -1.64
PDAP1-202ENST00000426447 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
PDAP1-202ENST00000426447 K7ERS5 55 aa4.74□□□□□ -1.65
PDAP1-202ENST00000426447 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
PDAP1-202ENST00000426447 BRK1Q8WUW1 75 aa4.74□□□□□ -1.65
PDAP1-202ENST00000426447 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
PDAP1-202ENST00000426447 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
PDAP1-202ENST00000426447 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.67
PDAP1-202ENST00000426447 SVIPQ8NHG7 77 aa4.61□□□□□ -1.67
PDAP1-202ENST00000426447 PRO0628Q9UI54 55 aa4.56□□□□□ -1.68
PDAP1-202ENST00000426447 KRTAP5-8O75690 187 aa4.53□□□□□ -1.68
PDAP1-202ENST00000426447 ROMO1P60602 79 aa4.53□□□□□ -1.68
PDAP1-202ENST00000426447 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
PDAP1-202ENST00000426447 AHNAKQ09666 5890 aaKnown RBP4.5□□□□□ -1.69
PDAP1-202ENST00000426447 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
PDAP1-202ENST00000426447 KRTAP5-2Q701N4 177 aa4.48□□□□□ -1.69
PDAP1-202ENST00000426447 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
PDAP1-202ENST00000426447 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.7
PDAP1-202ENST00000426447 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
PDAP1-202ENST00000426447 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
PDAP1-202ENST00000426447 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
PDAP1-202ENST00000426447 MT1AP04731 61 aa4.37□□□□□ -1.71
PDAP1-202ENST00000426447 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
PDAP1-202ENST00000426447 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
PDAP1-202ENST00000426447 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
PDAP1-202ENST00000426447 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
PDAP1-202ENST00000426447 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
PDAP1-202ENST00000426447 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
PDAP1-202ENST00000426447 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
PDAP1-202ENST00000426447 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
PDAP1-202ENST00000426447 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
PDAP1-202ENST00000426447 MT3P25713 68 aa4.06□□□□□ -1.76
PDAP1-202ENST00000426447 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
PDAP1-202ENST00000426447 H3BS24 57 aa3.9□□□□□ -1.79
PDAP1-202ENST00000426447 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
PDAP1-202ENST00000426447 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
PDAP1-202ENST00000426447 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
PDAP1-202ENST00000426447 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
PDAP1-202ENST00000426447 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
PDAP1-202ENST00000426447 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
PDAP1-202ENST00000426447 LUZP6Q538Z0 58 aa3.47□□□□□ -1.85
PDAP1-202ENST00000426447 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
PDAP1-202ENST00000426447 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
PDAP1-202ENST00000426447 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
PDAP1-202ENST00000426447 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
PDAP1-202ENST00000426447 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
PDAP1-202ENST00000426447 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
PDAP1-202ENST00000426447 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
PDAP1-202ENST00000426447 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
PDAP1-202ENST00000426447 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
PDAP1-202ENST00000426447 INE1O15225 51 aa2.7□□□□□ -1.98
PDAP1-202ENST00000426447 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
PDAP1-202ENST00000426447 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
PDAP1-202ENST00000426447 PRM1P04553 51 aa2.34□□□□□ -2.03
PDAP1-202ENST00000426447 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 9.8 ms