RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 MT1LQ93083 61 aa6.16□□□□□ -1.42
FN1-208ENST00000426059 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
FN1-208ENST00000426059 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
FN1-208ENST00000426059 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.03□□□□□ -1.44
FN1-208ENST00000426059 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
FN1-208ENST00000426059 KRTAP5-9P26371 169 aa5.98□□□□□ -1.45
FN1-208ENST00000426059 MDN1Q9NU22 5596 aa5.97□□□□□ -1.45
FN1-208ENST00000426059 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
FN1-208ENST00000426059 MT1GP13640 62 aa5.93□□□□□ -1.46
FN1-208ENST00000426059 MT1MQ8N339 61 aa5.91□□□□□ -1.46
FN1-208ENST00000426059 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
FN1-208ENST00000426059 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
FN1-208ENST00000426059 KRTAP9-6A8MVA2 160 aa5.87□□□□□ -1.47
FN1-208ENST00000426059 DSTQ03001 7570 aaKnown RBP5.86□□□□□ -1.47
FN1-208ENST00000426059 INE1O15225 51 aa5.85□□□□□ -1.47
FN1-208ENST00000426059 LCE1AQ5T7P2 110 aa5.85□□□□□ -1.47
FN1-208ENST00000426059 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
FN1-208ENST00000426059 SPRR2EP22531 72 aa5.81□□□□□ -1.48
FN1-208ENST00000426059 SPRR2BP35325 72 aa5.81□□□□□ -1.48
FN1-208ENST00000426059 SPRR2AP35326 72 aa5.81□□□□□ -1.48
FN1-208ENST00000426059 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
FN1-208ENST00000426059 KRTAP9-7A8MTY7 169 aa5.69□□□□□ -1.5
FN1-208ENST00000426059 SPRR2DP22532 72 aa5.59□□□□□ -1.51
FN1-208ENST00000426059 NEBP20929 6669 aa5.48□□□□□ -1.53
FN1-208ENST00000426059 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
FN1-208ENST00000426059 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
FN1-208ENST00000426059 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
FN1-208ENST00000426059 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
FN1-208ENST00000426059 KRTAP5-5Q701N2 237 aaPredicted RBP5.29□□□□□ -1.56
FN1-208ENST00000426059 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
FN1-208ENST00000426059 MT1AP04731 61 aa5.19□□□□□ -1.58
FN1-208ENST00000426059 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
FN1-208ENST00000426059 KRTAP20-1Q3LI63 56 aa5.01□□□□□ -1.61
FN1-208ENST00000426059 KRTAP5-4Q6L8H1 288 aa5□□□□□ -1.61
FN1-208ENST00000426059 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
FN1-208ENST00000426059 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
FN1-208ENST00000426059 MT4P47944 62 aa4.93□□□□□ -1.62
FN1-208ENST00000426059 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
FN1-208ENST00000426059 KRTAP4-6Q9BYQ5 205 aa4.89□□□□□ -1.63
FN1-208ENST00000426059 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
FN1-208ENST00000426059 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
FN1-208ENST00000426059 KRTAP6-2Q3LI66 62 aa4.82□□□□□ -1.64
FN1-208ENST00000426059 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
FN1-208ENST00000426059 HMCN1Q96RW7 5635 aa4.75□□□□□ -1.65
FN1-208ENST00000426059 KRTAP20-2Q3LI61 65 aa4.72□□□□□ -1.65
FN1-208ENST00000426059 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
FN1-208ENST00000426059 MT3P25713 68 aa4.7□□□□□ -1.66
FN1-208ENST00000426059 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
FN1-208ENST00000426059 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
FN1-208ENST00000426059 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
FN1-208ENST00000426059 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
FN1-208ENST00000426059 PRM1P04553 51 aa4.17□□□□□ -1.74
FN1-208ENST00000426059 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
FN1-208ENST00000426059 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.76
FN1-208ENST00000426059 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
FN1-208ENST00000426059 KRTAP5-1Q6L8H4 278 aa3.97□□□□□ -1.77
FN1-208ENST00000426059 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
FN1-208ENST00000426059 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
FN1-208ENST00000426059 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
FN1-208ENST00000426059 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
FN1-208ENST00000426059 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
FN1-208ENST00000426059 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
FN1-208ENST00000426059 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
FN1-208ENST00000426059 GPR98Q8WXG9 6306 aa3.64□□□□□ -1.83
FN1-208ENST00000426059 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
FN1-208ENST00000426059 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
FN1-208ENST00000426059 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
FN1-208ENST00000426059 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
FN1-208ENST00000426059 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
FN1-208ENST00000426059 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
FN1-208ENST00000426059 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
FN1-208ENST00000426059 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
FN1-208ENST00000426059 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
FN1-208ENST00000426059 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
FN1-208ENST00000426059 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
FN1-208ENST00000426059 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
FN1-208ENST00000426059 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 8.6 ms