RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 KRTAP2-4Q9BYR9 128 aa9.27□□□□□ -0.93
TSPAN3-203ENST00000424443 KRTAP19-3Q7Z4W3 81 aa9.24□□□□□ -0.93
TSPAN3-203ENST00000424443 ROMO1P60602 79 aa9.2□□□□□ -0.94
TSPAN3-203ENST00000424443 LCE5AQ5TCM9 118 aa9.16□□□□□ -0.94
TSPAN3-203ENST00000424443 KRTAP12-3P60328 96 aa9.11□□□□□ -0.95
TSPAN3-203ENST00000424443 MT1GP13640 62 aa9.08□□□□□ -0.96
TSPAN3-203ENST00000424443 KRTAP23-1A1A580 65 aa9.06□□□□□ -0.96
TSPAN3-203ENST00000424443 MT1LQ93083 61 aa9.06□□□□□ -0.96
TSPAN3-203ENST00000424443 LCE3BQ5TA77 95 aa9.05□□□□□ -0.96
TSPAN3-203ENST00000424443 PP632Q6XCG6 107 aa9.05□□□□□ -0.96
TSPAN3-203ENST00000424443 KRTAP2-2Q9BYT5 123 aa9.01□□□□□ -0.97
TSPAN3-203ENST00000424443 KRTAP2-1Q9BYU5 128 aa9.01□□□□□ -0.97
TSPAN3-203ENST00000424443 MT1MQ8N339 61 aa8.9□□□□□ -0.98
TSPAN3-203ENST00000424443 PMAIP1Q13794 54 aa8.86□□□□□ -0.99
TSPAN3-203ENST00000424443 DSTQ03001 7570 aaKnown RBP8.73□□□□□ -1.01
TSPAN3-203ENST00000424443 KRTAP15-1Q3LI76 137 aa8.69□□□□□ -1.02
TSPAN3-203ENST00000424443 KRTAP4-3Q9BYR4 195 aa8.67□□□□□ -1.02
TSPAN3-203ENST00000424443 KRTAP19-4Q3LI73 84 aa8.64□□□□□ -1.03
TSPAN3-203ENST00000424443 KRTAP4-7Q9BYR0 210 aa8.64□□□□□ -1.03
TSPAN3-203ENST00000424443 KTN1-AS1Q86SY8 53 aa8.62□□□□□ -1.03
TSPAN3-203ENST00000424443 LCE3CQ5T5A8 94 aa8.43□□□□□ -1.06
TSPAN3-203ENST00000424443 LCE4AQ5TA78 99 aa8.29□□□□□ -1.08
TSPAN3-203ENST00000424443 KRTAP4-9Q9BYQ8 210 aa8.27□□□□□ -1.09
TSPAN3-203ENST00000424443 PRAC1Q96KF2 57 aa8.21□□□□□ -1.1
TSPAN3-203ENST00000424443 KRTAP5-4Q6L8H1 288 aa8.17□□□□□ -1.1
TSPAN3-203ENST00000424443 LOC100996750A0A140TA64 210 aa8.16□□□□□ -1.1
TSPAN3-203ENST00000424443 MT4P47944 62 aa8.14□□□□□ -1.11
TSPAN3-203ENST00000424443 LCE1DQ5T752 114 aa8.13□□□□□ -1.11
TSPAN3-203ENST00000424443 KRTAP5-5Q701N2 237 aaPredicted RBP8.08□□□□□ -1.12
TSPAN3-203ENST00000424443 KRTAP4-6Q9BYQ5 205 aa7.92□□□□□ -1.14
TSPAN3-203ENST00000424443 KRTAP9-6A8MVA2 160 aa7.88□□□□□ -1.15
TSPAN3-203ENST00000424443 HMCN1Q96RW7 5635 aa7.87□□□□□ -1.15
TSPAN3-203ENST00000424443 KRTAP12-4P60329 112 aa7.85□□□□□ -1.15
TSPAN3-203ENST00000424443 SPRR5A0A1B0GTR4 108 aa7.73□□□□□ -1.17
TSPAN3-203ENST00000424443 MT1AP04731 61 aa7.73□□□□□ -1.17
TSPAN3-203ENST00000424443 KRTAP20-2Q3LI61 65 aa7.71□□□□□ -1.18
TSPAN3-203ENST00000424443 KRTAP6-1Q3LI64 71 aa7.63□□□□□ -1.19
TSPAN3-203ENST00000424443 SYNE1Q8NF91 8797 aaKnown RBP7.62□□□□□ -1.19
TSPAN3-203ENST00000424443 KRTAP5-3Q6L8H2 238 aa7.43□□□□□ -1.22
TSPAN3-203ENST00000424443 KRTAP9-4Q9BYQ2 154 aa7.42□□□□□ -1.22
TSPAN3-203ENST00000424443 GPR98Q8WXG9 6306 aa7.35□□□□□ -1.23
TSPAN3-203ENST00000424443 AHNAK2Q8IVF2 5795 aa7.33□□□□□ -1.24
TSPAN3-203ENST00000424443 KRTAP5-10Q6L8G5 202 aa7.27□□□□□ -1.25
TSPAN3-203ENST00000424443 KRTAP5-2Q701N4 177 aa7.23□□□□□ -1.25
TSPAN3-203ENST00000424443 KRTAP6-2Q3LI66 62 aa7.22□□□□□ -1.25
TSPAN3-203ENST00000424443 MT3P25713 68 aa7.08□□□□□ -1.28
TSPAN3-203ENST00000424443 KRTAP5-7Q6L8G8 165 aa6.91□□□□□ -1.3
TSPAN3-203ENST00000424443 KRTAP4-11Q9BYQ6 195 aa6.91□□□□□ -1.3
TSPAN3-203ENST00000424443 LUZP6Q538Z0 58 aa6.81□□□□□ -1.32
TSPAN3-203ENST00000424443 NDUFAF8A1L188 74 aa6.78□□□□□ -1.32
TSPAN3-203ENST00000424443 OBSCNQ5VST9 7968 aa6.67□□□□□ -1.34
TSPAN3-203ENST00000424443 KRTAP5-8O75690 187 aa6.65□□□□□ -1.35
TSPAN3-203ENST00000424443 H3BS24 57 aa6.61□□□□□ -1.35
TSPAN3-203ENST00000424443 KRTAP5-1Q6L8H4 278 aa6.4□□□□□ -1.38
TSPAN3-203ENST00000424443 LCE1EQ5T753 118 aa6.35□□□□□ -1.39
TSPAN3-203ENST00000424443 KRTAP9-9Q9BYP9 154 aa6.28□□□□□ -1.4
TSPAN3-203ENST00000424443 LCE3DQ9BYE3 92 aa6.2□□□□□ -1.42
TSPAN3-203ENST00000424443 MUC5ACP98088 5654 aa6.15□□□□□ -1.42
TSPAN3-203ENST00000424443 A0A0A0MQY5 61 aa6.13□□□□□ -1.43
TSPAN3-203ENST00000424443 MUC5BQ9HC84 5762 aaPredicted RBP5.99□□□□□ -1.45
TSPAN3-203ENST00000424443 LCE1BQ5T7P3 118 aa5.99□□□□□ -1.45
TSPAN3-203ENST00000424443 LCE3EQ5T5B0 92 aa5.92□□□□□ -1.46
TSPAN3-203ENST00000424443 KRTAP4-2Q9BYR5 136 aa5.91□□□□□ -1.46
TSPAN3-203ENST00000424443 LCE1CQ5T751 118 aa5.89□□□□□ -1.47
TSPAN3-203ENST00000424443 AHNAKQ09666 5890 aaKnown RBP5.82□□□□□ -1.48
TSPAN3-203ENST00000424443 INE1O15225 51 aa5.64□□□□□ -1.51
TSPAN3-203ENST00000424443 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.4□□□□□ -1.54
TSPAN3-203ENST00000424443 KRTAP5-11Q6L8G4 156 aa5.28□□□□□ -1.56
TSPAN3-203ENST00000424443 KRTAP4-12Q9BQ66 201 aa5.22□□□□□ -1.57
TSPAN3-203ENST00000424443 LCE1FQ5T754 118 aa5.03□□□□□ -1.6
TSPAN3-203ENST00000424443 KRTAP21-2Q3LI59 83 aa5□□□□□ -1.61
TSPAN3-203ENST00000424443 PRM1P04553 51 aa4.72□□□□□ -1.65
TSPAN3-203ENST00000424443 PHGR1C9JFL3 82 aa4.54□□□□□ -1.68
TSPAN3-203ENST00000424443 KRTAP4-4Q9BYR3 166 aa4.54□□□□□ -1.68
TSPAN3-203ENST00000424443 MUC19Q7Z5P9 8384 aa4.06□□□□□ -1.76
TSPAN3-203ENST00000424443 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
TSPAN3-203ENST00000424443 MUC16Q8WXI7 14507 aa2.87□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms