RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 NEBP20929 6669 aa4.61□□□□□ -1.67
LMO3-206ENST00000424192 MUC12Q9UKN1 5478 aa4.61□□□□□ -1.67
LMO3-206ENST00000424192 K7ERS5 55 aa4.59□□□□□ -1.67
LMO3-206ENST00000424192 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
LMO3-206ENST00000424192 MDN1Q9NU22 5596 aa4.58□□□□□ -1.68
LMO3-206ENST00000424192 A6NED7 52 aa4.55□□□□□ -1.68
LMO3-206ENST00000424192 TNP1P09430 55 aa4.51□□□□□ -1.69
LMO3-206ENST00000424192 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
LMO3-206ENST00000424192 SPRR2EP22531 72 aa4.47□□□□□ -1.69
LMO3-206ENST00000424192 SPRR2BP35325 72 aa4.47□□□□□ -1.69
LMO3-206ENST00000424192 SPRR2AP35326 72 aa4.47□□□□□ -1.69
LMO3-206ENST00000424192 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
LMO3-206ENST00000424192 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
LMO3-206ENST00000424192 KRTAP5-11Q6L8G4 156 aa4.44□□□□□ -1.7
LMO3-206ENST00000424192 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
LMO3-206ENST00000424192 CDC42SE1Q9NRR8 79 aa4.4□□□□□ -1.71
LMO3-206ENST00000424192 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
LMO3-206ENST00000424192 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
LMO3-206ENST00000424192 MT1EP04732 61 aa4.34□□□□□ -1.71
LMO3-206ENST00000424192 KRTAP20-1Q3LI63 56 aa4.34□□□□□ -1.71
LMO3-206ENST00000424192 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
LMO3-206ENST00000424192 SPRR2DP22532 72 aa4.32□□□□□ -1.72
LMO3-206ENST00000424192 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
LMO3-206ENST00000424192 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
LMO3-206ENST00000424192 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
LMO3-206ENST00000424192 KRTAP19-3Q7Z4W3 81 aa4.28□□□□□ -1.72
LMO3-206ENST00000424192 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
LMO3-206ENST00000424192 ROMO1P60602 79 aa4.26□□□□□ -1.73
LMO3-206ENST00000424192 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
LMO3-206ENST00000424192 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
LMO3-206ENST00000424192 KRTAP12-3P60328 96 aa4.21□□□□□ -1.74
LMO3-206ENST00000424192 MT1GP13640 62 aa4.2□□□□□ -1.74
LMO3-206ENST00000424192 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
LMO3-206ENST00000424192 MT1LQ93083 61 aa4.18□□□□□ -1.74
LMO3-206ENST00000424192 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
LMO3-206ENST00000424192 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
LMO3-206ENST00000424192 MT1MQ8N339 61 aa4.11□□□□□ -1.75
LMO3-206ENST00000424192 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
LMO3-206ENST00000424192 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
LMO3-206ENST00000424192 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
LMO3-206ENST00000424192 PMAIP1Q13794 54 aa3.91□□□□□ -1.78
LMO3-206ENST00000424192 PRO0628Q9UI54 55 aa3.84□□□□□ -1.79
LMO3-206ENST00000424192 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
LMO3-206ENST00000424192 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
LMO3-206ENST00000424192 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
LMO3-206ENST00000424192 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
LMO3-206ENST00000424192 MT4P47944 62 aa3.71□□□□□ -1.82
LMO3-206ENST00000424192 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
LMO3-206ENST00000424192 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
LMO3-206ENST00000424192 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
LMO3-206ENST00000424192 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
LMO3-206ENST00000424192 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
LMO3-206ENST00000424192 MT1AP04731 61 aa3.58□□□□□ -1.84
LMO3-206ENST00000424192 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
LMO3-206ENST00000424192 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
LMO3-206ENST00000424192 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
LMO3-206ENST00000424192 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
LMO3-206ENST00000424192 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
LMO3-206ENST00000424192 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
LMO3-206ENST00000424192 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
LMO3-206ENST00000424192 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
LMO3-206ENST00000424192 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
LMO3-206ENST00000424192 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
LMO3-206ENST00000424192 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
LMO3-206ENST00000424192 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
LMO3-206ENST00000424192 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
LMO3-206ENST00000424192 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
LMO3-206ENST00000424192 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
LMO3-206ENST00000424192 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
LMO3-206ENST00000424192 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
LMO3-206ENST00000424192 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
LMO3-206ENST00000424192 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
LMO3-206ENST00000424192 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
LMO3-206ENST00000424192 INE1O15225 51 aa2.28□□□□□ -2.04
LMO3-206ENST00000424192 PRM1P04553 51 aa2.15□□□□□ -2.07
LMO3-206ENST00000424192 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
LMO3-206ENST00000424192 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
LMO3-206ENST00000424192 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 77.4 ms