RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 PRAC1Q96KF2 57 aa5.84□□□□□ -1.47
ABCA1-203ENST00000423487 H3BS24 57 aa5.82□□□□□ -1.48
ABCA1-203ENST00000423487 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
ABCA1-203ENST00000423487 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
ABCA1-203ENST00000423487 MUC12Q9UKN1 5478 aa5.78□□□□□ -1.48
ABCA1-203ENST00000423487 SPRR2EP22531 72 aa5.74□□□□□ -1.49
ABCA1-203ENST00000423487 SPRR2BP35325 72 aa5.74□□□□□ -1.49
ABCA1-203ENST00000423487 SPRR2AP35326 72 aa5.74□□□□□ -1.49
ABCA1-203ENST00000423487 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
ABCA1-203ENST00000423487 KRTAP19-3Q7Z4W3 81 aa5.7□□□□□ -1.5
ABCA1-203ENST00000423487 MT1LQ93083 61 aa5.7□□□□□ -1.5
ABCA1-203ENST00000423487 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
ABCA1-203ENST00000423487 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
ABCA1-203ENST00000423487 MT1GP13640 62 aa5.64□□□□□ -1.51
ABCA1-203ENST00000423487 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
ABCA1-203ENST00000423487 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
ABCA1-203ENST00000423487 NEBP20929 6669 aa5.62□□□□□ -1.51
ABCA1-203ENST00000423487 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
ABCA1-203ENST00000423487 SPRR2DP22532 72 aa5.54□□□□□ -1.52
ABCA1-203ENST00000423487 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
ABCA1-203ENST00000423487 MT1MQ8N339 61 aa5.53□□□□□ -1.52
ABCA1-203ENST00000423487 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
ABCA1-203ENST00000423487 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
ABCA1-203ENST00000423487 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
ABCA1-203ENST00000423487 KRTAP4-3Q9BYR4 195 aa5.38□□□□□ -1.55
ABCA1-203ENST00000423487 KRTAP20-1Q3LI63 56 aa5.36□□□□□ -1.55
ABCA1-203ENST00000423487 KRTAP2-3P0C7H8 128 aa5.34□□□□□ -1.55
ABCA1-203ENST00000423487 KRTAP2-4Q9BYR9 128 aa5.34□□□□□ -1.55
ABCA1-203ENST00000423487 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
ABCA1-203ENST00000423487 DSTQ03001 7570 aaKnown RBP5.26□□□□□ -1.57
ABCA1-203ENST00000423487 KRTAP2-2Q9BYT5 123 aa5.22□□□□□ -1.57
ABCA1-203ENST00000423487 KRTAP2-1Q9BYU5 128 aa5.22□□□□□ -1.57
ABCA1-203ENST00000423487 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
ABCA1-203ENST00000423487 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
ABCA1-203ENST00000423487 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.58
ABCA1-203ENST00000423487 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
ABCA1-203ENST00000423487 KRTAP5-5Q701N2 237 aaPredicted RBP5.01□□□□□ -1.61
ABCA1-203ENST00000423487 KRTAP5-4Q6L8H1 288 aa4.94□□□□□ -1.62
ABCA1-203ENST00000423487 LUZP6Q538Z0 58 aa4.87□□□□□ -1.63
ABCA1-203ENST00000423487 MT1AP04731 61 aa4.87□□□□□ -1.63
ABCA1-203ENST00000423487 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
ABCA1-203ENST00000423487 MT4P47944 62 aa4.8□□□□□ -1.64
ABCA1-203ENST00000423487 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
ABCA1-203ENST00000423487 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
ABCA1-203ENST00000423487 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
ABCA1-203ENST00000423487 NDUFAF8A1L188 74 aa4.68□□□□□ -1.66
ABCA1-203ENST00000423487 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
ABCA1-203ENST00000423487 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
ABCA1-203ENST00000423487 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
ABCA1-203ENST00000423487 GPR98Q8WXG9 6306 aa4.47□□□□□ -1.69
ABCA1-203ENST00000423487 MT3P25713 68 aa4.44□□□□□ -1.7
ABCA1-203ENST00000423487 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
ABCA1-203ENST00000423487 AHNAK2Q8IVF2 5795 aa4.25□□□□□ -1.73
ABCA1-203ENST00000423487 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
ABCA1-203ENST00000423487 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
ABCA1-203ENST00000423487 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
ABCA1-203ENST00000423487 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
ABCA1-203ENST00000423487 INE1O15225 51 aa4□□□□□ -1.77
ABCA1-203ENST00000423487 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
ABCA1-203ENST00000423487 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
ABCA1-203ENST00000423487 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
ABCA1-203ENST00000423487 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
ABCA1-203ENST00000423487 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
ABCA1-203ENST00000423487 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.82
ABCA1-203ENST00000423487 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
ABCA1-203ENST00000423487 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
ABCA1-203ENST00000423487 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
ABCA1-203ENST00000423487 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
ABCA1-203ENST00000423487 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
ABCA1-203ENST00000423487 PRM1P04553 51 aa3.26□□□□□ -1.89
ABCA1-203ENST00000423487 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
ABCA1-203ENST00000423487 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
ABCA1-203ENST00000423487 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
ABCA1-203ENST00000423487 PHGR1C9JFL3 82 aa2.78□□□□□ -1.97
ABCA1-203ENST00000423487 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
ABCA1-203ENST00000423487 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
ABCA1-203ENST00000423487 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 6.9 ms