RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 KRTAP19-4Q3LI73 84 aa1.64□□□□□ -2.15
TOP2A-201ENST00000423485 KRTAP4-1Q9BYQ7 146 aa1.63□□□□□ -2.15
TOP2A-201ENST00000423485 KRTAP12-2P59991 146 aa1.62□□□□□ -2.15
TOP2A-201ENST00000423485 KRTAP2-3P0C7H8 128 aa1.61□□□□□ -2.15
TOP2A-201ENST00000423485 KRTAP2-4Q9BYR9 128 aa1.61□□□□□ -2.15
TOP2A-201ENST00000423485 MT1HP80294 61 aa1.61□□□□□ -2.15
TOP2A-201ENST00000423485 KRTAP10-12P60413 245 aa1.6□□□□□ -2.15
TOP2A-201ENST00000423485 C10orf95Q9H7T3 257 aa1.6□□□□□ -2.15
TOP2A-201ENST00000423485 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
TOP2A-201ENST00000423485 NDUFAF8A1L188 74 aa1.57□□□□□ -2.16
TOP2A-201ENST00000423485 KRTAP13-4Q3LI77 160 aa1.55□□□□□ -2.16
TOP2A-201ENST00000423485 KRTAP6-3Q3LI67 103 aa1.54□□□□□ -2.16
TOP2A-201ENST00000423485 KRTAP5-3Q6L8H2 238 aa1.53□□□□□ -2.16
TOP2A-201ENST00000423485 LCE1AQ5T7P2 110 aa1.53□□□□□ -2.16
TOP2A-201ENST00000423485 LCE3BQ5TA77 95 aa1.53□□□□□ -2.16
TOP2A-201ENST00000423485 MACF1Q9UPN3 7388 aaKnown RBP1.53□□□□□ -2.17
TOP2A-201ENST00000423485 KRTAP2-2Q9BYT5 123 aa1.51□□□□□ -2.17
TOP2A-201ENST00000423485 KRTAP2-1Q9BYU5 128 aa1.51□□□□□ -2.17
TOP2A-201ENST00000423485 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
TOP2A-201ENST00000423485 KRTAP12-1P59990 96 aa1.5□□□□□ -2.17
TOP2A-201ENST00000423485 MT2AP02795 61 aa1.49□□□□□ -2.17
TOP2A-201ENST00000423485 MT4P47944 62 aa1.46□□□□□ -2.18
TOP2A-201ENST00000423485 KRTAP9-6A8MVA2 160 aa1.45□□□□□ -2.18
TOP2A-201ENST00000423485 KRTAP5-2Q701N4 177 aa1.44□□□□□ -2.18
TOP2A-201ENST00000423485 GPR98Q8WXG9 6306 aa1.43□□□□□ -2.18
TOP2A-201ENST00000423485 KRTAP12-3P60328 96 aa1.43□□□□□ -2.18
TOP2A-201ENST00000423485 KRTAP19-6Q3LI70 58 aa1.42□□□□□ -2.18
TOP2A-201ENST00000423485 KRTAP9-8Q9BYQ0 159 aa1.42□□□□□ -2.18
TOP2A-201ENST00000423485 KRTAP10-5P60370 271 aa1.41□□□□□ -2.18
TOP2A-201ENST00000423485 MT1FP04733 61 aa1.4□□□□□ -2.18
TOP2A-201ENST00000423485 SYNE2Q8WXH0 6885 aaKnown RBP1.39□□□□□ -2.19
TOP2A-201ENST00000423485 SPRR2GQ9BYE4 73 aa1.38□□□□□ -2.19
TOP2A-201ENST00000423485 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
TOP2A-201ENST00000423485 KRTAP5-11Q6L8G4 156 aa1.36□□□□□ -2.19
TOP2A-201ENST00000423485 MT1GP13640 62 aa1.35□□□□□ -2.19
TOP2A-201ENST00000423485 KRTAP19-8Q3LI54 63 aa1.34□□□□□ -2.19
TOP2A-201ENST00000423485 LCE3AQ5TA76 89 aa1.31□□□□□ -2.2
TOP2A-201ENST00000423485 NEBP20929 6669 aa1.3□□□□□ -2.2
TOP2A-201ENST00000423485 MT1BP07438 61 aa1.27□□□□□ -2.21
TOP2A-201ENST00000423485 KRTAP19-5Q3LI72 72 aa1.27□□□□□ -2.21
TOP2A-201ENST00000423485 KRTAP19-3Q7Z4W3 81 aa1.27□□□□□ -2.21
TOP2A-201ENST00000423485 LCE1BQ5T7P3 118 aa1.25□□□□□ -2.21
TOP2A-201ENST00000423485 MT3P25713 68 aa1.25□□□□□ -2.21
TOP2A-201ENST00000423485 LCE1CQ5T751 118 aa1.25□□□□□ -2.21
TOP2A-201ENST00000423485 LCE1EQ5T753 118 aa1.25□□□□□ -2.21
TOP2A-201ENST00000423485 LCE1FQ5T754 118 aa1.25□□□□□ -2.21
TOP2A-201ENST00000423485 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
TOP2A-201ENST00000423485 KRTAP19-7Q3SYF9 63 aa1.24□□□□□ -2.21
TOP2A-201ENST00000423485 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
TOP2A-201ENST00000423485 MT1XP80297 61 aa1.22□□□□□ -2.21
TOP2A-201ENST00000423485 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
TOP2A-201ENST00000423485 KRTAP5-1Q6L8H4 278 aa1.18□□□□□ -2.22
TOP2A-201ENST00000423485 KRTAP5-4Q6L8H1 288 aa1.17□□□□□ -2.22
TOP2A-201ENST00000423485 MT1EP04732 61 aa1.17□□□□□ -2.22
TOP2A-201ENST00000423485 LCE3CQ5T5A8 94 aa1.16□□□□□ -2.22
TOP2A-201ENST00000423485 KRTAP4-3Q9BYR4 195 aa1.16□□□□□ -2.22
TOP2A-201ENST00000423485 MT1AP04731 61 aa1.13□□□□□ -2.23
TOP2A-201ENST00000423485 KRTAP5-5Q701N2 237 aaPredicted RBP1.13□□□□□ -2.23
TOP2A-201ENST00000423485 MT1MQ8N339 61 aa1.12□□□□□ -2.23
TOP2A-201ENST00000423485 MT1LQ93083 61 aa1.12□□□□□ -2.23
TOP2A-201ENST00000423485 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
TOP2A-201ENST00000423485 LCE3EQ5T5B0 92 aa1.11□□□□□ -2.23
TOP2A-201ENST00000423485 KRTAP4-4Q9BYR3 166 aa1.11□□□□□ -2.23
TOP2A-201ENST00000423485 KRTAP5-9P26371 169 aa1.1□□□□□ -2.23
TOP2A-201ENST00000423485 LCE3DQ9BYE3 92 aa1.08□□□□□ -2.24
TOP2A-201ENST00000423485 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
TOP2A-201ENST00000423485 AHNAK2Q8IVF2 5795 aa1.01□□□□□ -2.25
TOP2A-201ENST00000423485 KRTAP6-2Q3LI66 62 aa0.97□□□□□ -2.25
TOP2A-201ENST00000423485 KRTAP20-2Q3LI61 65 aa0.96□□□□□ -2.26
TOP2A-201ENST00000423485 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
TOP2A-201ENST00000423485 KRTAP6-1Q3LI64 71 aa0.9□□□□□ -2.27
TOP2A-201ENST00000423485 KRTAP5-10Q6L8G5 202 aa0.87□□□□□ -2.27
TOP2A-201ENST00000423485 KRTAP5-8O75690 187 aa0.85□□□□□ -2.27
TOP2A-201ENST00000423485 PRM1P04553 51 aa0.81□□□□□ -2.28
TOP2A-201ENST00000423485 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
TOP2A-201ENST00000423485 KRTAP21-2Q3LI59 83 aa0.74□□□□□ -2.29
TOP2A-201ENST00000423485 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 8.4 ms