RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 LCE3AQ5TA76 89 aa1.99□□□□□ -2.09
ITGB1-205ENST00000423113 KRTAP9-7A8MTY7 169 aa1.97□□□□□ -2.09
ITGB1-205ENST00000423113 KRTAP10-5P60370 271 aa1.97□□□□□ -2.09
ITGB1-205ENST00000423113 MT1XP80297 61 aa1.93□□□□□ -2.1
ITGB1-205ENST00000423113 KRTAP10-12P60413 245 aa1.92□□□□□ -2.1
ITGB1-205ENST00000423113 KRTAP5-9P26371 169 aa1.91□□□□□ -2.1
ITGB1-205ENST00000423113 KRTAP12-3P60328 96 aa1.91□□□□□ -2.1
ITGB1-205ENST00000423113 FCGBPQ9Y6R7 5405 aaPredicted RBP1.91□□□□□ -2.1
ITGB1-205ENST00000423113 KRTAP6-3Q3LI67 103 aa1.88□□□□□ -2.11
ITGB1-205ENST00000423113 FSIP2Q5CZC0 6907 aa1.86□□□□□ -2.11
ITGB1-205ENST00000423113 KRTAP8-1Q8IUC2 63 aa1.84□□□□□ -2.11
ITGB1-205ENST00000423113 GPR98Q8WXG9 6306 aa1.83□□□□□ -2.12
ITGB1-205ENST00000423113 MT3P25713 68 aa1.78□□□□□ -2.12
ITGB1-205ENST00000423113 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
ITGB1-205ENST00000423113 KRTAP10-7P60409 375 aaPredicted RBP1.76□□□□□ -2.13
ITGB1-205ENST00000423113 MACF1Q9UPN3 7388 aaKnown RBP1.76□□□□□ -2.13
ITGB1-205ENST00000423113 LCE3CQ5T5A8 94 aa1.75□□□□□ -2.13
ITGB1-205ENST00000423113 LCE1AQ5T7P2 110 aa1.75□□□□□ -2.13
ITGB1-205ENST00000423113 KRTAP19-7Q3SYF9 63 aa1.74□□□□□ -2.13
ITGB1-205ENST00000423113 NEBP20929 6669 aa1.73□□□□□ -2.13
ITGB1-205ENST00000423113 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
ITGB1-205ENST00000423113 KRTAP12-4P60329 112 aa1.71□□□□□ -2.13
ITGB1-205ENST00000423113 KMT2DO14686 5537 aa1.71□□□□□ -2.14
ITGB1-205ENST00000423113 MT1EP04732 61 aa1.7□□□□□ -2.14
ITGB1-205ENST00000423113 KRTAP19-5Q3LI72 72 aa1.7□□□□□ -2.14
ITGB1-205ENST00000423113 SPRR2FQ96RM1 72 aa1.7□□□□□ -2.14
ITGB1-205ENST00000423113 KRTAP20-1Q3LI63 56 aa1.69□□□□□ -2.14
ITGB1-205ENST00000423113 SYNE2Q8WXH0 6885 aaKnown RBP1.69□□□□□ -2.14
ITGB1-205ENST00000423113 LCE1FQ5T754 118 aa1.69□□□□□ -2.14
ITGB1-205ENST00000423113 SPRR2EP22531 72 aa1.68□□□□□ -2.14
ITGB1-205ENST00000423113 SPRR2BP35325 72 aa1.68□□□□□ -2.14
ITGB1-205ENST00000423113 SPRR2AP35326 72 aa1.68□□□□□ -2.14
ITGB1-205ENST00000423113 KRTAP2-3P0C7H8 128 aa1.68□□□□□ -2.14
ITGB1-205ENST00000423113 KRTAP2-4Q9BYR9 128 aa1.68□□□□□ -2.14
ITGB1-205ENST00000423113 MUC12Q9UKN1 5478 aa1.68□□□□□ -2.14
ITGB1-205ENST00000423113 OBSCNQ5VST9 7968 aa1.67□□□□□ -2.14
ITGB1-205ENST00000423113 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.14
ITGB1-205ENST00000423113 SYNE1Q8NF91 8797 aaKnown RBP1.64□□□□□ -2.15
ITGB1-205ENST00000423113 SPRR2DP22532 72 aa1.64□□□□□ -2.15
ITGB1-205ENST00000423113 KRTAP19-3Q7Z4W3 81 aa1.64□□□□□ -2.15
ITGB1-205ENST00000423113 MT1LQ93083 61 aa1.64□□□□□ -2.15
ITGB1-205ENST00000423113 KRTAP2-1Q9BYU5 128 aa1.63□□□□□ -2.15
ITGB1-205ENST00000423113 MT1GP13640 62 aa1.63□□□□□ -2.15
ITGB1-205ENST00000423113 KRTAP2-2Q9BYT5 123 aa1.62□□□□□ -2.15
ITGB1-205ENST00000423113 KRTAP9-6A8MVA2 160 aa1.62□□□□□ -2.15
ITGB1-205ENST00000423113 KRTAP5-5Q701N2 237 aaPredicted RBP1.62□□□□□ -2.15
ITGB1-205ENST00000423113 KRTAP5-4Q6L8H1 288 aa1.61□□□□□ -2.15
ITGB1-205ENST00000423113 LCE3EQ5T5B0 92 aa1.61□□□□□ -2.15
ITGB1-205ENST00000423113 MDN1Q9NU22 5596 aa1.6□□□□□ -2.15
ITGB1-205ENST00000423113 MT1MQ8N339 61 aa1.59□□□□□ -2.15
ITGB1-205ENST00000423113 LCE1EQ5T753 118 aa1.58□□□□□ -2.16
ITGB1-205ENST00000423113 PRM1P04553 51 aa1.55□□□□□ -2.16
ITGB1-205ENST00000423113 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
ITGB1-205ENST00000423113 LCE3DQ9BYE3 92 aa1.51□□□□□ -2.17
ITGB1-205ENST00000423113 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
ITGB1-205ENST00000423113 KRTAP5-2Q701N4 177 aa1.46□□□□□ -2.18
ITGB1-205ENST00000423113 KRTAP4-3Q9BYR4 195 aa1.44□□□□□ -2.18
ITGB1-205ENST00000423113 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
ITGB1-205ENST00000423113 MT1AP04731 61 aa1.42□□□□□ -2.18
ITGB1-205ENST00000423113 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
ITGB1-205ENST00000423113 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
ITGB1-205ENST00000423113 AHNAK2Q8IVF2 5795 aa1.37□□□□□ -2.19
ITGB1-205ENST00000423113 MT4P47944 62 aa1.37□□□□□ -2.19
ITGB1-205ENST00000423113 KRTAP6-2Q3LI66 62 aa1.36□□□□□ -2.19
ITGB1-205ENST00000423113 KRTAP5-1Q6L8H4 278 aa1.34□□□□□ -2.2
ITGB1-205ENST00000423113 KRTAP6-1Q3LI64 71 aa1.33□□□□□ -2.2
ITGB1-205ENST00000423113 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
ITGB1-205ENST00000423113 KRTAP5-7Q6L8G8 165 aa1.33□□□□□ -2.2
ITGB1-205ENST00000423113 KRTAP4-4Q9BYR3 166 aa1.32□□□□□ -2.2
ITGB1-205ENST00000423113 KRTAP5-8O75690 187 aa1.28□□□□□ -2.21
ITGB1-205ENST00000423113 LCE1CQ5T751 118 aa1.15□□□□□ -2.22
ITGB1-205ENST00000423113 LCE1BQ5T7P3 118 aa1.15□□□□□ -2.22
ITGB1-205ENST00000423113 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
ITGB1-205ENST00000423113 KRTAP21-2Q3LI59 83 aa0.97□□□□□ -2.25
ITGB1-205ENST00000423113 PHGR1C9JFL3 82 aa0.88□□□□□ -2.27
ITGB1-205ENST00000423113 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
ITGB1-205ENST00000423113 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms