RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 SNURFQ9Y675 71 aa2.87□□□□□ -1.95
HLA-DQA1-204ENST00000422863 LINC01554Q52M75 96 aa2.86□□□□□ -1.95
HLA-DQA1-204ENST00000422863 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
HLA-DQA1-204ENST00000422863 KTN1-AS1Q86SY8 53 aa2.86□□□□□ -1.95
HLA-DQA1-204ENST00000422863 R4GN34 69 aa2.86□□□□□ -1.95
HLA-DQA1-204ENST00000422863 M0QZ58 72 aa2.83□□□□□ -1.96
HLA-DQA1-204ENST00000422863 P0C880 135 aa2.83□□□□□ -1.96
HLA-DQA1-204ENST00000422863 CYP4F30PQ9H0H9 118 aa2.83□□□□□ -1.96
HLA-DQA1-204ENST00000422863 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
HLA-DQA1-204ENST00000422863 OCR1Q9BZK8 76 aa2.82□□□□□ -1.96
HLA-DQA1-204ENST00000422863 TRAV22A0A0B4J277 110 aa2.79□□□□□ -1.96
HLA-DQA1-204ENST00000422863 MT1EP04732 61 aa2.79□□□□□ -1.96
HLA-DQA1-204ENST00000422863 KRTAP19-7Q3SYF9 63 aa2.79□□□□□ -1.96
HLA-DQA1-204ENST00000422863 PSPHP1O15172 72 aa2.77□□□□□ -1.97
HLA-DQA1-204ENST00000422863 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
HLA-DQA1-204ENST00000422863 H3BPC8 53 aa2.76□□□□□ -1.97
HLA-DQA1-204ENST00000422863 CHKB-CPT1BH3BT56 60 aa2.76□□□□□ -1.97
HLA-DQA1-204ENST00000422863 SPANXA2-OT1Q8N9U9 137 aa2.76□□□□□ -1.97
HLA-DQA1-204ENST00000422863 TP53AIP1Q9HCN2 124 aa2.76□□□□□ -1.97
HLA-DQA1-204ENST00000422863 LOC101927531A0A1B0GV80 90 aa2.75□□□□□ -1.97
HLA-DQA1-204ENST00000422863 SPTSSBQ8NFR3 76 aa2.75□□□□□ -1.97
HLA-DQA1-204ENST00000422863 CDC42SE1Q9NRR8 79 aa2.75□□□□□ -1.97
HLA-DQA1-204ENST00000422863 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
HLA-DQA1-204ENST00000422863 A6NED7 52 aa2.73□□□□□ -1.97
HLA-DQA1-204ENST00000422863 PRR15LQ9BU68 103 aa2.73□□□□□ -1.97
HLA-DQA1-204ENST00000422863 MP68P56378 58 aa2.72□□□□□ -1.97
HLA-DQA1-204ENST00000422863 LINC00208Q96KT6 92 aa2.72□□□□□ -1.97
HLA-DQA1-204ENST00000422863 MT1GP13640 62 aa2.71□□□□□ -1.98
HLA-DQA1-204ENST00000422863 MT1MQ8N339 61 aa2.69□□□□□ -1.98
HLA-DQA1-204ENST00000422863 LINC01558Q9Y6Z2 57 aa2.69□□□□□ -1.98
HLA-DQA1-204ENST00000422863 PP632Q6XCG6 107 aa2.67□□□□□ -1.98
HLA-DQA1-204ENST00000422863 KRTAP19-5Q3LI72 72 aa2.66□□□□□ -1.98
HLA-DQA1-204ENST00000422863 A8MU10 97 aa2.64□□□□□ -1.99
HLA-DQA1-204ENST00000422863 H0Y9P7 68 aa2.64□□□□□ -1.99
HLA-DQA1-204ENST00000422863 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
HLA-DQA1-204ENST00000422863 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
HLA-DQA1-204ENST00000422863 COA5Q86WW8 74 aa2.64□□□□□ -1.99
HLA-DQA1-204ENST00000422863 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
HLA-DQA1-204ENST00000422863 MT1LQ93083 61 aa2.61□□□□□ -1.99
HLA-DQA1-204ENST00000422863 A0A0D9SG42 100 aa2.59□□□□□ -1.99
HLA-DQA1-204ENST00000422863 CAMK2N1Q7Z7J9 78 aa2.58□□□□□ -2
HLA-DQA1-204ENST00000422863 SPATA8Q6RVD6 105 aa2.57□□□□□ -2
HLA-DQA1-204ENST00000422863 PRAC1Q96KF2 57 aa2.57□□□□□ -2
HLA-DQA1-204ENST00000422863 ACYP2P14621 99 aa2.53□□□□□ -2
HLA-DQA1-204ENST00000422863 UQCR11O14957 56 aa2.52□□□□□ -2.01
HLA-DQA1-204ENST00000422863 SYNE1Q8NF91 8797 aaKnown RBP2.51□□□□□ -2.01
HLA-DQA1-204ENST00000422863 A0A1B0GU69 56 aa2.51□□□□□ -2.01
HLA-DQA1-204ENST00000422863 MIR22HGQ0VDD5 57 aa2.51□□□□□ -2.01
HLA-DQA1-204ENST00000422863 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
HLA-DQA1-204ENST00000422863 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
HLA-DQA1-204ENST00000422863 KRTAP13-4Q3LI77 160 aa2.5□□□□□ -2.01
HLA-DQA1-204ENST00000422863 DMAC1Q96GE9 116 aa2.48□□□□□ -2.01
HLA-DQA1-204ENST00000422863 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
HLA-DQA1-204ENST00000422863 ROMO1P60602 79 aa2.47□□□□□ -2.01
HLA-DQA1-204ENST00000422863 KRTAP25-1Q3LHN0 102 aa2.46□□□□□ -2.02
HLA-DQA1-204ENST00000422863 C10orf95Q9H7T3 257 aa2.45□□□□□ -2.02
HLA-DQA1-204ENST00000422863 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
HLA-DQA1-204ENST00000422863 A0A0A0MQY5 61 aa2.44□□□□□ -2.02
HLA-DQA1-204ENST00000422863 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
HLA-DQA1-204ENST00000422863 K7ERS5 55 aa2.4□□□□□ -2.03
HLA-DQA1-204ENST00000422863 SPINT4Q6UDR6 99 aa2.38□□□□□ -2.03
HLA-DQA1-204ENST00000422863 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.04
HLA-DQA1-204ENST00000422863 A0A1B0GU33 70 aa2.3□□□□□ -2.04
HLA-DQA1-204ENST00000422863 NDUFAF8A1L188 74 aa2.3□□□□□ -2.04
HLA-DQA1-204ENST00000422863 KRTAP12-1P59990 96 aa2.29□□□□□ -2.04
HLA-DQA1-204ENST00000422863 KRTAP12-3P60328 96 aa2.29□□□□□ -2.04
HLA-DQA1-204ENST00000422863 LUZP6Q538Z0 58 aa2.29□□□□□ -2.04
HLA-DQA1-204ENST00000422863 TNP1P09430 55 aa2.27□□□□□ -2.05
HLA-DQA1-204ENST00000422863 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
HLA-DQA1-204ENST00000422863 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.06
HLA-DQA1-204ENST00000422863 MT1AP04731 61 aa2.19□□□□□ -2.06
HLA-DQA1-204ENST00000422863 INE1O15225 51 aa1.97□□□□□ -2.09
HLA-DQA1-204ENST00000422863 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
HLA-DQA1-204ENST00000422863 LCE3DQ9BYE3 92 aa1.77□□□□□ -2.13
HLA-DQA1-204ENST00000422863 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
HLA-DQA1-204ENST00000422863 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
HLA-DQA1-204ENST00000422863 PRM1P04553 51 aa1.21□□□□□ -2.22
HLA-DQA1-204ENST00000422863 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 65.9 ms