RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 NDUFC1O43677 76 aa1.77□□□□□ -2.13
CDC42EP3-202ENST00000422687 GTF2H5Q6ZYL4 71 aa1.77□□□□□ -2.13
CDC42EP3-202ENST00000422687 BRK1Q8WUW1 75 aa1.77□□□□□ -2.13
CDC42EP3-202ENST00000422687 LINC01554Q52M75 96 aa1.76□□□□□ -2.13
CDC42EP3-202ENST00000422687 COL5A1-AS1Q5SY13 56 aa1.76□□□□□ -2.13
CDC42EP3-202ENST00000422687 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
CDC42EP3-202ENST00000422687 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
CDC42EP3-202ENST00000422687 UQCRQO14949 82 aa1.74□□□□□ -2.13
CDC42EP3-202ENST00000422687 TMEM258P61165 79 aa1.74□□□□□ -2.13
CDC42EP3-202ENST00000422687 LOC101927531A0A1B0GV80 90 aa1.73□□□□□ -2.13
CDC42EP3-202ENST00000422687 TRAV22A0A0B4J277 110 aa1.72□□□□□ -2.13
CDC42EP3-202ENST00000422687 K7EP34 96 aa1.72□□□□□ -2.13
CDC42EP3-202ENST00000422687 M0QZ58 72 aa1.72□□□□□ -2.13
CDC42EP3-202ENST00000422687 KRTAP19-7Q3SYF9 63 aa1.72□□□□□ -2.13
CDC42EP3-202ENST00000422687 KRTAP19-3Q7Z4W3 81 aa1.72□□□□□ -2.13
CDC42EP3-202ENST00000422687 UBL5Q9BZL1 73 aa1.72□□□□□ -2.13
CDC42EP3-202ENST00000422687 CCDC179H3BU77 68 aa1.71□□□□□ -2.14
CDC42EP3-202ENST00000422687 MT1EP04732 61 aa1.71□□□□□ -2.14
CDC42EP3-202ENST00000422687 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
CDC42EP3-202ENST00000422687 C20orf197Q8N268 126 aa1.71□□□□□ -2.14
CDC42EP3-202ENST00000422687 ACYP1P07311 99 aa1.7□□□□□ -2.14
CDC42EP3-202ENST00000422687 KRTAP13-4Q3LI77 160 aa1.7□□□□□ -2.14
CDC42EP3-202ENST00000422687 A0A1W2PPM0 123 aa1.69□□□□□ -2.14
CDC42EP3-202ENST00000422687 MT4P47944 62 aa1.68□□□□□ -2.14
CDC42EP3-202ENST00000422687 SERP1Q9Y6X1 66 aa1.68□□□□□ -2.14
CDC42EP3-202ENST00000422687 KRTAP12-3P60328 96 aa1.67□□□□□ -2.14
CDC42EP3-202ENST00000422687 CYSTM1Q9H1C7 97 aa1.67□□□□□ -2.14
CDC42EP3-202ENST00000422687 ATOX1O00244 68 aa1.66□□□□□ -2.14
CDC42EP3-202ENST00000422687 MT1GP13640 62 aa1.66□□□□□ -2.14
CDC42EP3-202ENST00000422687 KRTAP12-1P59990 96 aa1.66□□□□□ -2.14
CDC42EP3-202ENST00000422687 SPCS1Q9Y6A9 102 aa1.66□□□□□ -2.14
CDC42EP3-202ENST00000422687 H0Y9P7 68 aa1.65□□□□□ -2.15
CDC42EP3-202ENST00000422687 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
CDC42EP3-202ENST00000422687 ATP5EP56381 51 aaPredicted RBP1.63□□□□□ -2.15
CDC42EP3-202ENST00000422687 MT1MQ8N339 61 aa1.63□□□□□ -2.15
CDC42EP3-202ENST00000422687 Q1T7F1 81 aa1.62□□□□□ -2.15
CDC42EP3-202ENST00000422687 MT-ATP8P03928 68 aa1.61□□□□□ -2.15
CDC42EP3-202ENST00000422687 DMAC1Q96GE9 116 aa1.61□□□□□ -2.15
CDC42EP3-202ENST00000422687 COX7CP15954 63 aa1.6□□□□□ -2.15
CDC42EP3-202ENST00000422687 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
CDC42EP3-202ENST00000422687 ROMO1P60602 79 aa1.6□□□□□ -2.15
CDC42EP3-202ENST00000422687 KRTAP19-5Q3LI72 72 aa1.6□□□□□ -2.15
CDC42EP3-202ENST00000422687 COA5Q86WW8 74 aa1.6□□□□□ -2.15
CDC42EP3-202ENST00000422687 MT1LQ93083 61 aa1.6□□□□□ -2.15
CDC42EP3-202ENST00000422687 LINC00208Q96KT6 92 aa1.6□□□□□ -2.15
CDC42EP3-202ENST00000422687 SYNE1Q8NF91 8797 aaKnown RBP1.59□□□□□ -2.16
CDC42EP3-202ENST00000422687 KRTAP20-2Q3LI61 65 aa1.58□□□□□ -2.16
CDC42EP3-202ENST00000422687 ATP5EP2Q5VTU8 51 aa1.58□□□□□ -2.16
CDC42EP3-202ENST00000422687 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
CDC42EP3-202ENST00000422687 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
CDC42EP3-202ENST00000422687 F8W1H4 67 aa1.57□□□□□ -2.16
CDC42EP3-202ENST00000422687 A0A0D9SG42 100 aa1.56□□□□□ -2.16
CDC42EP3-202ENST00000422687 ETDBQ3ZM63 59 aa1.56□□□□□ -2.16
CDC42EP3-202ENST00000422687 MIR22HGQ0VDD5 57 aa1.52□□□□□ -2.17
CDC42EP3-202ENST00000422687 SPTSSBQ8NFR3 76 aa1.52□□□□□ -2.17
CDC42EP3-202ENST00000422687 ACYP2P14621 99 aa1.51□□□□□ -2.17
CDC42EP3-202ENST00000422687 SERP2Q8N6R1 65 aa1.51□□□□□ -2.17
CDC42EP3-202ENST00000422687 LINC00643Q86TS7 51 aa1.5□□□□□ -2.17
CDC42EP3-202ENST00000422687 CDC42SE1Q9NRR8 79 aa1.5□□□□□ -2.17
CDC42EP3-202ENST00000422687 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
CDC42EP3-202ENST00000422687 C10orf95Q9H7T3 257 aa1.49□□□□□ -2.17
CDC42EP3-202ENST00000422687 CHKB-CPT1BH3BT56 60 aa1.45□□□□□ -2.18
CDC42EP3-202ENST00000422687 H7BZZ5 65 aa1.45□□□□□ -2.18
CDC42EP3-202ENST00000422687 TNP1P09430 55 aa1.41□□□□□ -2.18
CDC42EP3-202ENST00000422687 SPATA8Q6RVD6 105 aa1.41□□□□□ -2.18
CDC42EP3-202ENST00000422687 KRTAP6-1Q3LI64 71 aa1.36□□□□□ -2.19
CDC42EP3-202ENST00000422687 INE1O15225 51 aa1.35□□□□□ -2.19
CDC42EP3-202ENST00000422687 MT1AP04731 61 aa1.35□□□□□ -2.19
CDC42EP3-202ENST00000422687 SNURFQ9Y675 71 aa1.35□□□□□ -2.19
CDC42EP3-202ENST00000422687 UQCR11O14957 56 aa1.33□□□□□ -2.2
CDC42EP3-202ENST00000422687 PRR15LQ9BU68 103 aa1.33□□□□□ -2.2
CDC42EP3-202ENST00000422687 KRTAP6-2Q3LI66 62 aa1.32□□□□□ -2.2
CDC42EP3-202ENST00000422687 LINC01558Q9Y6Z2 57 aa1.32□□□□□ -2.2
CDC42EP3-202ENST00000422687 A0A1B0GU69 56 aa1.26□□□□□ -2.21
CDC42EP3-202ENST00000422687 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
CDC42EP3-202ENST00000422687 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
CDC42EP3-202ENST00000422687 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
CDC42EP3-202ENST00000422687 PRM1P04553 51 aa0.56□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 36.6 ms