RNA–Protein interactions for RNA: ENST00000422453.6

CNBP-201, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNBP, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-201ENST00000422453 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
CNBP-201ENST00000422453 MDN1Q9NU22 5596 aa5.68□□□□□ -1.5
CNBP-201ENST00000422453 KRTAP8-1Q8IUC2 63 aa5.67□□□□□ -1.5
CNBP-201ENST00000422453 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
CNBP-201ENST00000422453 LCE5AQ5TCM9 118 aa5.62□□□□□ -1.51
CNBP-201ENST00000422453 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
CNBP-201ENST00000422453 KRTAP20-1Q3LI63 56 aa5.59□□□□□ -1.51
CNBP-201ENST00000422453 A0A0A0MQY5 61 aa5.59□□□□□ -1.52
CNBP-201ENST00000422453 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
CNBP-201ENST00000422453 SPRR2EP22531 72 aa5.57□□□□□ -1.52
CNBP-201ENST00000422453 SPRR2BP35325 72 aa5.57□□□□□ -1.52
CNBP-201ENST00000422453 SPRR2AP35326 72 aa5.57□□□□□ -1.52
CNBP-201ENST00000422453 CAMK2N1Q7Z7J9 78 aa5.57□□□□□ -1.52
CNBP-201ENST00000422453 KRTAP10-12P60413 245 aa5.55□□□□□ -1.52
CNBP-201ENST00000422453 LUZP6Q538Z0 58 aa5.55□□□□□ -1.52
CNBP-201ENST00000422453 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
CNBP-201ENST00000422453 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
CNBP-201ENST00000422453 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
CNBP-201ENST00000422453 LCE1AQ5T7P2 110 aa5.47□□□□□ -1.53
CNBP-201ENST00000422453 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
CNBP-201ENST00000422453 SPRR2DP22532 72 aa5.39□□□□□ -1.55
CNBP-201ENST00000422453 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
CNBP-201ENST00000422453 KRTAP2-2Q9BYT5 123 aa5.3□□□□□ -1.56
CNBP-201ENST00000422453 KRTAP2-1Q9BYU5 128 aa5.3□□□□□ -1.56
CNBP-201ENST00000422453 KRTAP19-7Q3SYF9 63 aa5.21□□□□□ -1.58
CNBP-201ENST00000422453 MT1EP04732 61 aa5.18□□□□□ -1.58
CNBP-201ENST00000422453 TNP1P09430 55 aa5.14□□□□□ -1.59
CNBP-201ENST00000422453 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
CNBP-201ENST00000422453 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
CNBP-201ENST00000422453 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
CNBP-201ENST00000422453 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
CNBP-201ENST00000422453 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
CNBP-201ENST00000422453 MT1GP13640 62 aa5.03□□□□□ -1.6
CNBP-201ENST00000422453 INE1O15225 51 aa4.99□□□□□ -1.61
CNBP-201ENST00000422453 MT1LQ93083 61 aa4.96□□□□□ -1.62
CNBP-201ENST00000422453 MT1MQ8N339 61 aa4.92□□□□□ -1.62
CNBP-201ENST00000422453 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
CNBP-201ENST00000422453 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
CNBP-201ENST00000422453 GPR98Q8WXG9 6306 aa4.73□□□□□ -1.65
CNBP-201ENST00000422453 MT4P47944 62 aa4.7□□□□□ -1.66
CNBP-201ENST00000422453 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
CNBP-201ENST00000422453 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
CNBP-201ENST00000422453 KRTAP5-5Q701N2 237 aaPredicted RBP4.48□□□□□ -1.69
CNBP-201ENST00000422453 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
CNBP-201ENST00000422453 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
CNBP-201ENST00000422453 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
CNBP-201ENST00000422453 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
CNBP-201ENST00000422453 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
CNBP-201ENST00000422453 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
CNBP-201ENST00000422453 MT1AP04731 61 aa4.22□□□□□ -1.73
CNBP-201ENST00000422453 MT3P25713 68 aa4.19□□□□□ -1.74
CNBP-201ENST00000422453 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
CNBP-201ENST00000422453 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
CNBP-201ENST00000422453 KRTAP5-7Q6L8G8 165 aa4.17□□□□□ -1.74
CNBP-201ENST00000422453 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
CNBP-201ENST00000422453 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
CNBP-201ENST00000422453 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
CNBP-201ENST00000422453 KRTAP5-8O75690 187 aa3.84□□□□□ -1.79
CNBP-201ENST00000422453 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
CNBP-201ENST00000422453 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
CNBP-201ENST00000422453 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
CNBP-201ENST00000422453 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
CNBP-201ENST00000422453 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
CNBP-201ENST00000422453 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
CNBP-201ENST00000422453 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
CNBP-201ENST00000422453 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
CNBP-201ENST00000422453 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
CNBP-201ENST00000422453 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
CNBP-201ENST00000422453 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
CNBP-201ENST00000422453 PRM1P04553 51 aa3.31□□□□□ -1.88
CNBP-201ENST00000422453 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
CNBP-201ENST00000422453 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
CNBP-201ENST00000422453 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
CNBP-201ENST00000422453 PHGR1C9JFL3 82 aa2.56□□□□□ -2
CNBP-201ENST00000422453 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
CNBP-201ENST00000422453 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
CNBP-201ENST00000422453 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 8.8 ms