RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
HPS4-204ENST00000422379 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
HPS4-204ENST00000422379 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
HPS4-204ENST00000422379 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
HPS4-204ENST00000422379 LCE1DQ5T752 114 aa3.47□□□□□ -1.85
HPS4-204ENST00000422379 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
HPS4-204ENST00000422379 MUC12Q9UKN1 5478 aa3.42□□□□□ -1.86
HPS4-204ENST00000422379 KRTAP8-1Q8IUC2 63 aa3.4□□□□□ -1.86
HPS4-204ENST00000422379 MDN1Q9NU22 5596 aa3.38□□□□□ -1.87
HPS4-204ENST00000422379 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
HPS4-204ENST00000422379 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
HPS4-204ENST00000422379 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.88
HPS4-204ENST00000422379 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
HPS4-204ENST00000422379 KRTAP5-9P26371 169 aa3.31□□□□□ -1.88
HPS4-204ENST00000422379 MT1EP04732 61 aa3.29□□□□□ -1.88
HPS4-204ENST00000422379 MT3P25713 68 aa3.29□□□□□ -1.88
HPS4-204ENST00000422379 SPRR2FQ96RM1 72 aa3.29□□□□□ -1.88
HPS4-204ENST00000422379 KRTAP4-9Q9BYQ8 210 aa3.29□□□□□ -1.88
HPS4-204ENST00000422379 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
HPS4-204ENST00000422379 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
HPS4-204ENST00000422379 KRTAP4-7Q9BYR0 210 aa3.25□□□□□ -1.89
HPS4-204ENST00000422379 NEBP20929 6669 aa3.24□□□□□ -1.89
HPS4-204ENST00000422379 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
HPS4-204ENST00000422379 MT1LQ93083 61 aa3.21□□□□□ -1.9
HPS4-204ENST00000422379 SPRR2EP22531 72 aa3.16□□□□□ -1.9
HPS4-204ENST00000422379 SPRR2BP35325 72 aa3.16□□□□□ -1.9
HPS4-204ENST00000422379 SPRR2AP35326 72 aa3.16□□□□□ -1.9
HPS4-204ENST00000422379 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
HPS4-204ENST00000422379 DSTQ03001 7570 aaKnown RBP3.15□□□□□ -1.9
HPS4-204ENST00000422379 LCE1FQ5T754 118 aa3.15□□□□□ -1.9
HPS4-204ENST00000422379 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
HPS4-204ENST00000422379 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
HPS4-204ENST00000422379 MT1MQ8N339 61 aa3.1□□□□□ -1.91
HPS4-204ENST00000422379 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
HPS4-204ENST00000422379 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
HPS4-204ENST00000422379 MT1GP13640 62 aa3.09□□□□□ -1.91
HPS4-204ENST00000422379 SPRR2DP22532 72 aa3.04□□□□□ -1.92
HPS4-204ENST00000422379 INE1O15225 51 aa3.01□□□□□ -1.93
HPS4-204ENST00000422379 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
HPS4-204ENST00000422379 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
HPS4-204ENST00000422379 KRTAP20-1Q3LI63 56 aa2.95□□□□□ -1.94
HPS4-204ENST00000422379 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
HPS4-204ENST00000422379 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
HPS4-204ENST00000422379 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
HPS4-204ENST00000422379 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
HPS4-204ENST00000422379 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
HPS4-204ENST00000422379 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
HPS4-204ENST00000422379 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
HPS4-204ENST00000422379 MT1AP04731 61 aa2.7□□□□□ -1.98
HPS4-204ENST00000422379 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
HPS4-204ENST00000422379 MT4P47944 62 aa2.66□□□□□ -1.98
HPS4-204ENST00000422379 KRTAP12-4P60329 112 aa2.59□□□□□ -1.99
HPS4-204ENST00000422379 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
HPS4-204ENST00000422379 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
HPS4-204ENST00000422379 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
HPS4-204ENST00000422379 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
HPS4-204ENST00000422379 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
HPS4-204ENST00000422379 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
HPS4-204ENST00000422379 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
HPS4-204ENST00000422379 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
HPS4-204ENST00000422379 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
HPS4-204ENST00000422379 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
HPS4-204ENST00000422379 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
HPS4-204ENST00000422379 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
HPS4-204ENST00000422379 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
HPS4-204ENST00000422379 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
HPS4-204ENST00000422379 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
HPS4-204ENST00000422379 PRM1P04553 51 aa2.15□□□□□ -2.07
HPS4-204ENST00000422379 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
HPS4-204ENST00000422379 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
HPS4-204ENST00000422379 LCE1CQ5T751 118 aa2□□□□□ -2.09
HPS4-204ENST00000422379 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
HPS4-204ENST00000422379 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
HPS4-204ENST00000422379 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
HPS4-204ENST00000422379 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
HPS4-204ENST00000422379 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
HPS4-204ENST00000422379 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
HPS4-204ENST00000422379 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 50.2 ms