RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 KRTAP19-3Q7Z4W3 81 aa3.21□□□□□ -1.9
MDC1-204ENST00000422266 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
MDC1-204ENST00000422266 K7ERS5 55 aa3.2□□□□□ -1.9
MDC1-204ENST00000422266 TNP1P09430 55 aa3.19□□□□□ -1.9
MDC1-204ENST00000422266 PP632Q6XCG6 107 aa3.19□□□□□ -1.9
MDC1-204ENST00000422266 MT1GP13640 62 aa3.17□□□□□ -1.9
MDC1-204ENST00000422266 C10orf95Q9H7T3 257 aa3.17□□□□□ -1.9
MDC1-204ENST00000422266 PMAIP1Q13794 54 aa3.15□□□□□ -1.91
MDC1-204ENST00000422266 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
MDC1-204ENST00000422266 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
MDC1-204ENST00000422266 ROMO1P60602 79 aa3.09□□□□□ -1.91
MDC1-204ENST00000422266 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
MDC1-204ENST00000422266 KTN1-AS1Q86SY8 53 aa3.07□□□□□ -1.92
MDC1-204ENST00000422266 MT1LQ93083 61 aa3.07□□□□□ -1.92
MDC1-204ENST00000422266 MT1MQ8N339 61 aa3.05□□□□□ -1.92
MDC1-204ENST00000422266 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
MDC1-204ENST00000422266 KRTAP25-1Q3LHN0 102 aa3.03□□□□□ -1.92
MDC1-204ENST00000422266 KRTAP4-9Q9BYQ8 210 aa3.01□□□□□ -1.93
MDC1-204ENST00000422266 KRTAP12-3P60328 96 aa3□□□□□ -1.93
MDC1-204ENST00000422266 LCE1DQ5T752 114 aa2.97□□□□□ -1.93
MDC1-204ENST00000422266 KRTAP19-4Q3LI73 84 aa2.96□□□□□ -1.94
MDC1-204ENST00000422266 PRAC1Q96KF2 57 aa2.94□□□□□ -1.94
MDC1-204ENST00000422266 KRTAP23-1A1A580 65 aa2.93□□□□□ -1.94
MDC1-204ENST00000422266 MT4P47944 62 aa2.93□□□□□ -1.94
MDC1-204ENST00000422266 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
MDC1-204ENST00000422266 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
MDC1-204ENST00000422266 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
MDC1-204ENST00000422266 KRTAP4-7Q9BYR0 210 aa2.84□□□□□ -1.95
MDC1-204ENST00000422266 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
MDC1-204ENST00000422266 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
MDC1-204ENST00000422266 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
MDC1-204ENST00000422266 KRTAP15-1Q3LI76 137 aa2.82□□□□□ -1.96
MDC1-204ENST00000422266 KRTAP5-10Q6L8G5 202 aa2.82□□□□□ -1.96
MDC1-204ENST00000422266 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
MDC1-204ENST00000422266 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
MDC1-204ENST00000422266 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
MDC1-204ENST00000422266 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
MDC1-204ENST00000422266 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
MDC1-204ENST00000422266 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
MDC1-204ENST00000422266 LOC100996750A0A140TA64 210 aa2.7□□□□□ -1.98
MDC1-204ENST00000422266 MT1AP04731 61 aa2.63□□□□□ -1.99
MDC1-204ENST00000422266 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
MDC1-204ENST00000422266 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
MDC1-204ENST00000422266 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
MDC1-204ENST00000422266 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
MDC1-204ENST00000422266 H3BS24 57 aa2.54□□□□□ -2
MDC1-204ENST00000422266 KRTAP9-4Q9BYQ2 154 aa2.54□□□□□ -2
MDC1-204ENST00000422266 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
MDC1-204ENST00000422266 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
MDC1-204ENST00000422266 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
MDC1-204ENST00000422266 MT3P25713 68 aa2.45□□□□□ -2.02
MDC1-204ENST00000422266 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
MDC1-204ENST00000422266 NDUFAF8A1L188 74 aa2.41□□□□□ -2.02
MDC1-204ENST00000422266 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
MDC1-204ENST00000422266 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
MDC1-204ENST00000422266 KRTAP9-9Q9BYP9 154 aa2.36□□□□□ -2.03
MDC1-204ENST00000422266 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
MDC1-204ENST00000422266 LUZP6Q538Z0 58 aa2.34□□□□□ -2.03
MDC1-204ENST00000422266 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
MDC1-204ENST00000422266 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
MDC1-204ENST00000422266 A0A0A0MQY5 61 aa2.23□□□□□ -2.05
MDC1-204ENST00000422266 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
MDC1-204ENST00000422266 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
MDC1-204ENST00000422266 INE1O15225 51 aa2.06□□□□□ -2.08
MDC1-204ENST00000422266 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
MDC1-204ENST00000422266 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
MDC1-204ENST00000422266 KRTAP4-12Q9BQ66 201 aa1.92□□□□□ -2.1
MDC1-204ENST00000422266 LCE3EQ5T5B0 92 aa1.9□□□□□ -2.11
MDC1-204ENST00000422266 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
MDC1-204ENST00000422266 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
MDC1-204ENST00000422266 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
MDC1-204ENST00000422266 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
MDC1-204ENST00000422266 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
MDC1-204ENST00000422266 PRM1P04553 51 aa1.63□□□□□ -2.15
MDC1-204ENST00000422266 KRTAP4-4Q9BYR3 166 aa1.51□□□□□ -2.17
MDC1-204ENST00000422266 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
MDC1-204ENST00000422266 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
MDC1-204ENST00000422266 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms