RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
BRAT1-202ENST00000421712 KRTAP19-3Q7Z4W3 81 aa5.73□□□□□ -1.49
BRAT1-202ENST00000421712 CDC42SE1Q9NRR8 79 aa5.73□□□□□ -1.49
BRAT1-202ENST00000421712 LCE5AQ5TCM9 118 aa5.69□□□□□ -1.5
BRAT1-202ENST00000421712 LCE3BQ5TA77 95 aa5.67□□□□□ -1.5
BRAT1-202ENST00000421712 MT1GP13640 62 aa5.63□□□□□ -1.51
BRAT1-202ENST00000421712 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
BRAT1-202ENST00000421712 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
BRAT1-202ENST00000421712 ROMO1P60602 79 aa5.61□□□□□ -1.51
BRAT1-202ENST00000421712 MT1LQ93083 61 aa5.61□□□□□ -1.51
BRAT1-202ENST00000421712 DSTQ03001 7570 aaKnown RBP5.53□□□□□ -1.52
BRAT1-202ENST00000421712 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
BRAT1-202ENST00000421712 MT1MQ8N339 61 aa5.53□□□□□ -1.52
BRAT1-202ENST00000421712 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
BRAT1-202ENST00000421712 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
BRAT1-202ENST00000421712 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
BRAT1-202ENST00000421712 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
BRAT1-202ENST00000421712 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
BRAT1-202ENST00000421712 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
BRAT1-202ENST00000421712 HMCN1Q96RW7 5635 aa5.23□□□□□ -1.57
BRAT1-202ENST00000421712 AHNAK2Q8IVF2 5795 aa5.21□□□□□ -1.58
BRAT1-202ENST00000421712 LCE3CQ5T5A8 94 aa5.2□□□□□ -1.58
BRAT1-202ENST00000421712 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
BRAT1-202ENST00000421712 PMAIP1Q13794 54 aa5.14□□□□□ -1.59
BRAT1-202ENST00000421712 MT4P47944 62 aa5.13□□□□□ -1.59
BRAT1-202ENST00000421712 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
BRAT1-202ENST00000421712 KRTAP5-10Q6L8G5 202 aa5.1□□□□□ -1.59
BRAT1-202ENST00000421712 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
BRAT1-202ENST00000421712 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
BRAT1-202ENST00000421712 KRTAP5-7Q6L8G8 165 aa5□□□□□ -1.61
BRAT1-202ENST00000421712 KRTAP5-5Q701N2 237 aaPredicted RBP5□□□□□ -1.61
BRAT1-202ENST00000421712 KRTAP4-6Q9BYQ5 205 aa4.96□□□□□ -1.62
BRAT1-202ENST00000421712 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
BRAT1-202ENST00000421712 PRO0628Q9UI54 55 aa4.93□□□□□ -1.62
BRAT1-202ENST00000421712 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
BRAT1-202ENST00000421712 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
BRAT1-202ENST00000421712 KRTAP9-6A8MVA2 160 aa4.85□□□□□ -1.63
BRAT1-202ENST00000421712 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
BRAT1-202ENST00000421712 KRTAP20-2Q3LI61 65 aa4.81□□□□□ -1.64
BRAT1-202ENST00000421712 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
BRAT1-202ENST00000421712 MT1AP04731 61 aa4.78□□□□□ -1.64
BRAT1-202ENST00000421712 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
BRAT1-202ENST00000421712 KTN1-AS1Q86SY8 53 aa4.67□□□□□ -1.66
BRAT1-202ENST00000421712 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
BRAT1-202ENST00000421712 AHNAKQ09666 5890 aaKnown RBP4.55□□□□□ -1.68
BRAT1-202ENST00000421712 SVIPQ8NHG7 77 aa4.53□□□□□ -1.68
BRAT1-202ENST00000421712 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
BRAT1-202ENST00000421712 KRTAP5-2Q701N4 177 aa4.49□□□□□ -1.69
BRAT1-202ENST00000421712 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
BRAT1-202ENST00000421712 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
BRAT1-202ENST00000421712 MT3P25713 68 aa4.39□□□□□ -1.71
BRAT1-202ENST00000421712 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
BRAT1-202ENST00000421712 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
BRAT1-202ENST00000421712 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
BRAT1-202ENST00000421712 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
BRAT1-202ENST00000421712 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
BRAT1-202ENST00000421712 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
BRAT1-202ENST00000421712 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
BRAT1-202ENST00000421712 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
BRAT1-202ENST00000421712 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
BRAT1-202ENST00000421712 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
BRAT1-202ENST00000421712 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
BRAT1-202ENST00000421712 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
BRAT1-202ENST00000421712 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
BRAT1-202ENST00000421712 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
BRAT1-202ENST00000421712 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
BRAT1-202ENST00000421712 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
BRAT1-202ENST00000421712 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
BRAT1-202ENST00000421712 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
BRAT1-202ENST00000421712 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
BRAT1-202ENST00000421712 A0A0A0MQY5 61 aa2.94□□□□□ -1.94
BRAT1-202ENST00000421712 H3BS24 57 aa2.94□□□□□ -1.94
BRAT1-202ENST00000421712 PRM1P04553 51 aa2.89□□□□□ -1.95
BRAT1-202ENST00000421712 INE1O15225 51 aa2.86□□□□□ -1.95
BRAT1-202ENST00000421712 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
BRAT1-202ENST00000421712 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
BRAT1-202ENST00000421712 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
BRAT1-202ENST00000421712 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 72.8 ms