RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 MDN1Q9NU22 5596 aa5.92□□□□□ -1.46
DDX55-203ENST00000421670 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
DDX55-203ENST00000421670 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
DDX55-203ENST00000421670 PMAIP1Q13794 54 aa5.83□□□□□ -1.48
DDX55-203ENST00000421670 LCE1DQ5T752 114 aa5.83□□□□□ -1.48
DDX55-203ENST00000421670 MT1EP04732 61 aa5.8□□□□□ -1.48
DDX55-203ENST00000421670 SPRR2EP22531 72 aa5.78□□□□□ -1.48
DDX55-203ENST00000421670 SPRR2BP35325 72 aa5.78□□□□□ -1.48
DDX55-203ENST00000421670 SPRR2AP35326 72 aa5.78□□□□□ -1.48
DDX55-203ENST00000421670 NEBP20929 6669 aa5.77□□□□□ -1.49
DDX55-203ENST00000421670 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
DDX55-203ENST00000421670 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
DDX55-203ENST00000421670 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
DDX55-203ENST00000421670 PP632Q6XCG6 107 aa5.67□□□□□ -1.5
DDX55-203ENST00000421670 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
DDX55-203ENST00000421670 KRTAP19-3Q7Z4W3 81 aa5.64□□□□□ -1.51
DDX55-203ENST00000421670 MT1LQ93083 61 aa5.62□□□□□ -1.51
DDX55-203ENST00000421670 KRTAP4-9Q9BYQ8 210 aa5.62□□□□□ -1.51
DDX55-203ENST00000421670 SPRR2DP22532 72 aa5.57□□□□□ -1.52
DDX55-203ENST00000421670 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
DDX55-203ENST00000421670 MT1GP13640 62 aa5.54□□□□□ -1.52
DDX55-203ENST00000421670 PRAC1Q96KF2 57 aa5.53□□□□□ -1.52
DDX55-203ENST00000421670 MT1MQ8N339 61 aa5.49□□□□□ -1.53
DDX55-203ENST00000421670 KRTAP4-11Q9BYQ6 195 aa5.46□□□□□ -1.54
DDX55-203ENST00000421670 DSTQ03001 7570 aaKnown RBP5.44□□□□□ -1.54
DDX55-203ENST00000421670 KRTAP20-1Q3LI63 56 aa5.43□□□□□ -1.54
DDX55-203ENST00000421670 KTN1-AS1Q86SY8 53 aa5.41□□□□□ -1.54
DDX55-203ENST00000421670 KRTAP4-2Q9BYR5 136 aa5.41□□□□□ -1.54
DDX55-203ENST00000421670 KRTAP2-3P0C7H8 128 aa5.39□□□□□ -1.55
DDX55-203ENST00000421670 KRTAP2-4Q9BYR9 128 aa5.39□□□□□ -1.55
DDX55-203ENST00000421670 KRTAP4-3Q9BYR4 195 aa5.38□□□□□ -1.55
DDX55-203ENST00000421670 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
DDX55-203ENST00000421670 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
DDX55-203ENST00000421670 KRTAP2-1Q9BYU5 128 aa5.25□□□□□ -1.57
DDX55-203ENST00000421670 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
DDX55-203ENST00000421670 LUZP6Q538Z0 58 aa5.11□□□□□ -1.59
DDX55-203ENST00000421670 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
DDX55-203ENST00000421670 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
DDX55-203ENST00000421670 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
DDX55-203ENST00000421670 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
DDX55-203ENST00000421670 MT4P47944 62 aa4.87□□□□□ -1.63
DDX55-203ENST00000421670 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
DDX55-203ENST00000421670 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
DDX55-203ENST00000421670 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
DDX55-203ENST00000421670 MT1AP04731 61 aa4.77□□□□□ -1.65
DDX55-203ENST00000421670 KRTAP6-1Q3LI64 71 aa4.75□□□□□ -1.65
DDX55-203ENST00000421670 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
DDX55-203ENST00000421670 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.67
DDX55-203ENST00000421670 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
DDX55-203ENST00000421670 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
DDX55-203ENST00000421670 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.7
DDX55-203ENST00000421670 MT3P25713 68 aa4.32□□□□□ -1.72
DDX55-203ENST00000421670 GPR98Q8WXG9 6306 aa4.31□□□□□ -1.72
DDX55-203ENST00000421670 KRTAP5-10Q6L8G5 202 aa4.23□□□□□ -1.73
DDX55-203ENST00000421670 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
DDX55-203ENST00000421670 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
DDX55-203ENST00000421670 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
DDX55-203ENST00000421670 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
DDX55-203ENST00000421670 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
DDX55-203ENST00000421670 INE1O15225 51 aa3.9□□□□□ -1.78
DDX55-203ENST00000421670 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
DDX55-203ENST00000421670 LCE1EQ5T753 118 aa3.84□□□□□ -1.8
DDX55-203ENST00000421670 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
DDX55-203ENST00000421670 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
DDX55-203ENST00000421670 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
DDX55-203ENST00000421670 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
DDX55-203ENST00000421670 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
DDX55-203ENST00000421670 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.84
DDX55-203ENST00000421670 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
DDX55-203ENST00000421670 AHNAKQ09666 5890 aaKnown RBP3.46□□□□□ -1.86
DDX55-203ENST00000421670 PRM1P04553 51 aa3.12□□□□□ -1.91
DDX55-203ENST00000421670 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
DDX55-203ENST00000421670 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
DDX55-203ENST00000421670 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
DDX55-203ENST00000421670 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
DDX55-203ENST00000421670 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
DDX55-203ENST00000421670 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms