RNA–Protein interactions for RNA: ENST00000421496.5

GGCX-202, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 4

Gene GGCX, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-202ENST00000421496 LCE3BQ5TA77 95 aa4.31□□□□□ -1.72
GGCX-202ENST00000421496 H3BS24 57 aa4.29□□□□□ -1.72
GGCX-202ENST00000421496 TNP1P09430 55 aa4.27□□□□□ -1.73
GGCX-202ENST00000421496 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
GGCX-202ENST00000421496 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
GGCX-202ENST00000421496 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
GGCX-202ENST00000421496 MT1EP04732 61 aa4.22□□□□□ -1.73
GGCX-202ENST00000421496 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
GGCX-202ENST00000421496 KRTAP19-3Q7Z4W3 81 aa4.19□□□□□ -1.74
GGCX-202ENST00000421496 KRTAP19-5Q3LI72 72 aa4.17□□□□□ -1.74
GGCX-202ENST00000421496 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
GGCX-202ENST00000421496 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
GGCX-202ENST00000421496 MT1GP13640 62 aa4.1□□□□□ -1.75
GGCX-202ENST00000421496 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
GGCX-202ENST00000421496 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
GGCX-202ENST00000421496 MT1LQ93083 61 aa4.04□□□□□ -1.76
GGCX-202ENST00000421496 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
GGCX-202ENST00000421496 MT1MQ8N339 61 aa4.03□□□□□ -1.76
GGCX-202ENST00000421496 KRTAP4-9Q9BYQ8 210 aa4.03□□□□□ -1.76
GGCX-202ENST00000421496 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
GGCX-202ENST00000421496 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
GGCX-202ENST00000421496 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
GGCX-202ENST00000421496 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
GGCX-202ENST00000421496 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
GGCX-202ENST00000421496 LCE4AQ5TA78 99 aa3.9□□□□□ -1.79
GGCX-202ENST00000421496 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
GGCX-202ENST00000421496 MT4P47944 62 aa3.89□□□□□ -1.79
GGCX-202ENST00000421496 KRTAP4-7Q9BYR0 210 aa3.88□□□□□ -1.79
GGCX-202ENST00000421496 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
GGCX-202ENST00000421496 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
GGCX-202ENST00000421496 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
GGCX-202ENST00000421496 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.8
GGCX-202ENST00000421496 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
GGCX-202ENST00000421496 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
GGCX-202ENST00000421496 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
GGCX-202ENST00000421496 LOC100996750A0A140TA64 210 aa3.67□□□□□ -1.82
GGCX-202ENST00000421496 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
GGCX-202ENST00000421496 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
GGCX-202ENST00000421496 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
GGCX-202ENST00000421496 SPRR5A0A1B0GTR4 108 aa3.6□□□□□ -1.83
GGCX-202ENST00000421496 KRTAP5-3Q6L8H2 238 aa3.56□□□□□ -1.84
GGCX-202ENST00000421496 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
GGCX-202ENST00000421496 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
GGCX-202ENST00000421496 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
GGCX-202ENST00000421496 MT1AP04731 61 aa3.43□□□□□ -1.86
GGCX-202ENST00000421496 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
GGCX-202ENST00000421496 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
GGCX-202ENST00000421496 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
GGCX-202ENST00000421496 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
GGCX-202ENST00000421496 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
GGCX-202ENST00000421496 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
GGCX-202ENST00000421496 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
GGCX-202ENST00000421496 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
GGCX-202ENST00000421496 MT3P25713 68 aa3.16□□□□□ -1.9
GGCX-202ENST00000421496 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
GGCX-202ENST00000421496 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
GGCX-202ENST00000421496 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
GGCX-202ENST00000421496 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
GGCX-202ENST00000421496 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
GGCX-202ENST00000421496 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
GGCX-202ENST00000421496 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
GGCX-202ENST00000421496 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
GGCX-202ENST00000421496 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
GGCX-202ENST00000421496 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
GGCX-202ENST00000421496 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
GGCX-202ENST00000421496 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
GGCX-202ENST00000421496 INE1O15225 51 aa2.62□□□□□ -1.99
GGCX-202ENST00000421496 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
GGCX-202ENST00000421496 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
GGCX-202ENST00000421496 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
GGCX-202ENST00000421496 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
GGCX-202ENST00000421496 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
GGCX-202ENST00000421496 PRM1P04553 51 aa2.23□□□□□ -2.05
GGCX-202ENST00000421496 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
GGCX-202ENST00000421496 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
GGCX-202ENST00000421496 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
GGCX-202ENST00000421496 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
GGCX-202ENST00000421496 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 463.8 ms