RNA–Protein interactions for RNA: ENST00000420743.6

HNRNPC-202, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2 BASIC

Gene HNRNPC, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-202ENST00000420743 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
HNRNPC-202ENST00000420743 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
HNRNPC-202ENST00000420743 A0A0D9SG42 100 aa4.73□□□□□ -1.65
HNRNPC-202ENST00000420743 CAMK2N1Q7Z7J9 78 aa4.7□□□□□ -1.66
HNRNPC-202ENST00000420743 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
HNRNPC-202ENST00000420743 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
HNRNPC-202ENST00000420743 SPINT4Q6UDR6 99 aa4.64□□□□□ -1.67
HNRNPC-202ENST00000420743 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
HNRNPC-202ENST00000420743 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
HNRNPC-202ENST00000420743 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
HNRNPC-202ENST00000420743 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
HNRNPC-202ENST00000420743 SPRR2DP22532 72 aa4.57□□□□□ -1.68
HNRNPC-202ENST00000420743 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
HNRNPC-202ENST00000420743 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
HNRNPC-202ENST00000420743 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
HNRNPC-202ENST00000420743 KRTAP19-7Q3SYF9 63 aa4.49□□□□□ -1.69
HNRNPC-202ENST00000420743 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
HNRNPC-202ENST00000420743 KRTAP2-1Q9BYU5 128 aa4.46□□□□□ -1.7
HNRNPC-202ENST00000420743 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
HNRNPC-202ENST00000420743 MT1EP04732 61 aa4.44□□□□□ -1.7
HNRNPC-202ENST00000420743 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
HNRNPC-202ENST00000420743 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
HNRNPC-202ENST00000420743 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
HNRNPC-202ENST00000420743 KRTAP19-3Q7Z4W3 81 aa4.38□□□□□ -1.71
HNRNPC-202ENST00000420743 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
HNRNPC-202ENST00000420743 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
HNRNPC-202ENST00000420743 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
HNRNPC-202ENST00000420743 TNP1P09430 55 aa4.32□□□□□ -1.72
HNRNPC-202ENST00000420743 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
HNRNPC-202ENST00000420743 MT1GP13640 62 aa4.26□□□□□ -1.73
HNRNPC-202ENST00000420743 MT1LQ93083 61 aa4.26□□□□□ -1.73
HNRNPC-202ENST00000420743 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
HNRNPC-202ENST00000420743 MT1MQ8N339 61 aa4.23□□□□□ -1.73
HNRNPC-202ENST00000420743 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
HNRNPC-202ENST00000420743 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
HNRNPC-202ENST00000420743 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
HNRNPC-202ENST00000420743 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
HNRNPC-202ENST00000420743 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
HNRNPC-202ENST00000420743 MT4P47944 62 aa4.04□□□□□ -1.76
HNRNPC-202ENST00000420743 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
HNRNPC-202ENST00000420743 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
HNRNPC-202ENST00000420743 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
HNRNPC-202ENST00000420743 AHNAK2Q8IVF2 5795 aa3.86□□□□□ -1.79
HNRNPC-202ENST00000420743 LCE3CQ5T5A8 94 aa3.82□□□□□ -1.8
HNRNPC-202ENST00000420743 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
HNRNPC-202ENST00000420743 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
HNRNPC-202ENST00000420743 INE1O15225 51 aa3.74□□□□□ -1.81
HNRNPC-202ENST00000420743 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
HNRNPC-202ENST00000420743 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
HNRNPC-202ENST00000420743 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
HNRNPC-202ENST00000420743 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
HNRNPC-202ENST00000420743 KRTAP5-7Q6L8G8 165 aa3.61□□□□□ -1.83
HNRNPC-202ENST00000420743 MT1AP04731 61 aa3.59□□□□□ -1.83
HNRNPC-202ENST00000420743 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
HNRNPC-202ENST00000420743 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
HNRNPC-202ENST00000420743 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
HNRNPC-202ENST00000420743 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
HNRNPC-202ENST00000420743 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
HNRNPC-202ENST00000420743 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
HNRNPC-202ENST00000420743 MT3P25713 68 aa3.28□□□□□ -1.88
HNRNPC-202ENST00000420743 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
HNRNPC-202ENST00000420743 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
HNRNPC-202ENST00000420743 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
HNRNPC-202ENST00000420743 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
HNRNPC-202ENST00000420743 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
HNRNPC-202ENST00000420743 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
HNRNPC-202ENST00000420743 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
HNRNPC-202ENST00000420743 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
HNRNPC-202ENST00000420743 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
HNRNPC-202ENST00000420743 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
HNRNPC-202ENST00000420743 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
HNRNPC-202ENST00000420743 PRM1P04553 51 aa2.48□□□□□ -2.01
HNRNPC-202ENST00000420743 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
HNRNPC-202ENST00000420743 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
HNRNPC-202ENST00000420743 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
HNRNPC-202ENST00000420743 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
HNRNPC-202ENST00000420743 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 22.8 ms