RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 NEBP20929 6669 aa1.94□□□□□ -2.1
PTPN22-202ENST00000420377 KRTAP2-3P0C7H8 128 aa1.92□□□□□ -2.1
PTPN22-202ENST00000420377 KRTAP2-4Q9BYR9 128 aa1.92□□□□□ -2.1
PTPN22-202ENST00000420377 LRP2P98164 4655 aa1.92□□□□□ -2.1
PTPN22-202ENST00000420377 MT3P25713 68 aa1.92□□□□□ -2.1
PTPN22-202ENST00000420377 KRTAP2-2Q9BYT5 123 aa1.92□□□□□ -2.1
PTPN22-202ENST00000420377 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
PTPN22-202ENST00000420377 KRTAP13-2Q52LG2 175 aa1.87□□□□□ -2.11
PTPN22-202ENST00000420377 M0QZ58 72 aa1.86□□□□□ -2.11
PTPN22-202ENST00000420377 LCE3CQ5T5A8 94 aa1.85□□□□□ -2.11
PTPN22-202ENST00000420377 KRTAP10-7P60409 375 aaPredicted RBP1.85□□□□□ -2.11
PTPN22-202ENST00000420377 KRTAP4-1Q9BYQ7 146 aa1.85□□□□□ -2.11
PTPN22-202ENST00000420377 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
PTPN22-202ENST00000420377 KRTAP2-1Q9BYU5 128 aa1.82□□□□□ -2.12
PTPN22-202ENST00000420377 FLGP20930 4061 aaPredicted RBP1.81□□□□□ -2.12
PTPN22-202ENST00000420377 M0R2T5 61 aa1.8□□□□□ -2.12
PTPN22-202ENST00000420377 MT2AP02795 61 aa1.77□□□□□ -2.13
PTPN22-202ENST00000420377 KRTAP10-12P60413 245 aa1.77□□□□□ -2.13
PTPN22-202ENST00000420377 USH2AO75445 5202 aa1.77□□□□□ -2.13
PTPN22-202ENST00000420377 KRTAP4-3Q9BYR4 195 aa1.75□□□□□ -2.13
PTPN22-202ENST00000420377 LPAP08519 4548 aa1.74□□□□□ -2.13
PTPN22-202ENST00000420377 KRTAP10-10P60014 251 aa1.71□□□□□ -2.14
PTPN22-202ENST00000420377 LCE3EQ5T5B0 92 aa1.71□□□□□ -2.14
PTPN22-202ENST00000420377 SYNE2Q8WXH0 6885 aaKnown RBP1.71□□□□□ -2.14
PTPN22-202ENST00000420377 AHNAK2Q8IVF2 5795 aa1.7□□□□□ -2.14
PTPN22-202ENST00000420377 FCGBPQ9Y6R7 5405 aaPredicted RBP1.69□□□□□ -2.14
PTPN22-202ENST00000420377 MT1FP04733 61 aa1.69□□□□□ -2.14
PTPN22-202ENST00000420377 KRTAP19-8Q3LI54 63 aa1.69□□□□□ -2.14
PTPN22-202ENST00000420377 KRTAP10-5P60370 271 aa1.69□□□□□ -2.14
PTPN22-202ENST00000420377 MACF1Q9UPN3 7388 aaKnown RBP1.66□□□□□ -2.14
PTPN22-202ENST00000420377 TNP1P09430 55 aa1.65□□□□□ -2.15
PTPN22-202ENST00000420377 KRTAP5-5Q701N2 237 aaPredicted RBP1.64□□□□□ -2.15
PTPN22-202ENST00000420377 SPRR2GQ9BYE4 73 aa1.62□□□□□ -2.15
PTPN22-202ENST00000420377 KRTAP5-10Q6L8G5 202 aa1.6□□□□□ -2.15
PTPN22-202ENST00000420377 LCE1EQ5T753 118 aa1.6□□□□□ -2.15
PTPN22-202ENST00000420377 SPRR2EP22531 72 aa1.59□□□□□ -2.15
PTPN22-202ENST00000420377 SPRR2BP35325 72 aa1.59□□□□□ -2.15
PTPN22-202ENST00000420377 SPRR2AP35326 72 aa1.59□□□□□ -2.15
PTPN22-202ENST00000420377 C9orf92A6NGG3 77 aa1.59□□□□□ -2.16
PTPN22-202ENST00000420377 SPRR2DP22532 72 aa1.57□□□□□ -2.16
PTPN22-202ENST00000420377 MT1BP07438 61 aa1.56□□□□□ -2.16
PTPN22-202ENST00000420377 FSIP2Q5CZC0 6907 aa1.55□□□□□ -2.16
PTPN22-202ENST00000420377 KMT2DO14686 5537 aa1.53□□□□□ -2.17
PTPN22-202ENST00000420377 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
PTPN22-202ENST00000420377 LCE3DQ9BYE3 92 aa1.5□□□□□ -2.17
PTPN22-202ENST00000420377 KRTAP8-1Q8IUC2 63 aa1.49□□□□□ -2.17
PTPN22-202ENST00000420377 SPRR2FQ96RM1 72 aa1.49□□□□□ -2.17
PTPN22-202ENST00000420377 KRTAP12-4P60329 112 aa1.48□□□□□ -2.17
PTPN22-202ENST00000420377 OBSCNQ5VST9 7968 aa1.46□□□□□ -2.17
PTPN22-202ENST00000420377 MDN1Q9NU22 5596 aa1.45□□□□□ -2.18
PTPN22-202ENST00000420377 LCE3AQ5TA76 89 aa1.45□□□□□ -2.18
PTPN22-202ENST00000420377 KRTAP9-6A8MVA2 160 aa1.44□□□□□ -2.18
PTPN22-202ENST00000420377 KRTAP12-3P60328 96 aa1.38□□□□□ -2.19
PTPN22-202ENST00000420377 MT1XP80297 61 aa1.38□□□□□ -2.19
PTPN22-202ENST00000420377 MT1GP13640 62 aa1.38□□□□□ -2.19
PTPN22-202ENST00000420377 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
PTPN22-202ENST00000420377 MUC12Q9UKN1 5478 aa1.33□□□□□ -2.2
PTPN22-202ENST00000420377 MT1EP04732 61 aa1.29□□□□□ -2.2
PTPN22-202ENST00000420377 KRTAP20-2Q3LI61 65 aa1.28□□□□□ -2.2
PTPN22-202ENST00000420377 KRTAP19-5Q3LI72 72 aa1.27□□□□□ -2.21
PTPN22-202ENST00000420377 MT1MQ8N339 61 aa1.27□□□□□ -2.21
PTPN22-202ENST00000420377 DSTQ03001 7570 aaKnown RBP1.25□□□□□ -2.21
PTPN22-202ENST00000420377 PRM1P04553 51 aa1.25□□□□□ -2.21
PTPN22-202ENST00000420377 KRTAP19-7Q3SYF9 63 aa1.24□□□□□ -2.21
PTPN22-202ENST00000420377 MT4P47944 62 aa1.21□□□□□ -2.22
PTPN22-202ENST00000420377 MT1LQ93083 61 aa1.18□□□□□ -2.22
PTPN22-202ENST00000420377 MT1AP04731 61 aa1.16□□□□□ -2.22
PTPN22-202ENST00000420377 SYNE1Q8NF91 8797 aaKnown RBP1.12□□□□□ -2.23
PTPN22-202ENST00000420377 KRTAP6-2Q3LI66 62 aa1.07□□□□□ -2.24
PTPN22-202ENST00000420377 LCE1CQ5T751 118 aa1.01□□□□□ -2.25
PTPN22-202ENST00000420377 LCE1BQ5T7P3 118 aa1.01□□□□□ -2.25
PTPN22-202ENST00000420377 MUC19Q7Z5P9 8384 aa0.97□□□□□ -2.25
PTPN22-202ENST00000420377 PHGR1C9JFL3 82 aa0.92□□□□□ -2.26
PTPN22-202ENST00000420377 KRTAP6-1Q3LI64 71 aa0.91□□□□□ -2.26
PTPN22-202ENST00000420377 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.26
PTPN22-202ENST00000420377 KRTAP21-2Q3LI59 83 aa0.75□□□□□ -2.29
PTPN22-202ENST00000420377 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 70.5 ms