RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 A8MU10 97 aa5.26□□□□□ -1.57
NOD1-205ENST00000419799 ATP5EP56381 51 aaPredicted RBP5.25□□□□□ -1.57
NOD1-205ENST00000419799 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
NOD1-205ENST00000419799 SMIM26A0A096LP01 95 aa5.24□□□□□ -1.57
NOD1-205ENST00000419799 PRR15LQ9BU68 103 aa5.18□□□□□ -1.58
NOD1-205ENST00000419799 KRTAP19-3Q7Z4W3 81 aa5.17□□□□□ -1.58
NOD1-205ENST00000419799 TMEM258P61165 79 aa5.14□□□□□ -1.59
NOD1-205ENST00000419799 KRTAP5-10Q6L8G5 202 aa5.14□□□□□ -1.59
NOD1-205ENST00000419799 LINC01558Q9Y6Z2 57 aa5.14□□□□□ -1.59
NOD1-205ENST00000419799 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
NOD1-205ENST00000419799 MT4P47944 62 aa5.11□□□□□ -1.59
NOD1-205ENST00000419799 MT1EP04732 61 aa5.1□□□□□ -1.59
NOD1-205ENST00000419799 HMCN1Q96RW7 5635 aa5.08□□□□□ -1.6
NOD1-205ENST00000419799 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
NOD1-205ENST00000419799 C10orf95Q9H7T3 257 aa5.06□□□□□ -1.6
NOD1-205ENST00000419799 AHNAK2Q8IVF2 5795 aa5.05□□□□□ -1.6
NOD1-205ENST00000419799 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.03□□□□□ -1.6
NOD1-205ENST00000419799 UQCR11O14957 56 aa5.01□□□□□ -1.61
NOD1-205ENST00000419799 TNP1P09430 55 aa5.01□□□□□ -1.61
NOD1-205ENST00000419799 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
NOD1-205ENST00000419799 MT1GP13640 62 aa5□□□□□ -1.61
NOD1-205ENST00000419799 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
NOD1-205ENST00000419799 KRTAP5-4Q6L8H1 288 aa4.96□□□□□ -1.62
NOD1-205ENST00000419799 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
NOD1-205ENST00000419799 KRTAP5-11Q6L8G4 156 aa4.94□□□□□ -1.62
NOD1-205ENST00000419799 MIR22HGQ0VDD5 57 aa4.93□□□□□ -1.62
NOD1-205ENST00000419799 PSPHP1O15172 72 aa4.9□□□□□ -1.63
NOD1-205ENST00000419799 MT1MQ8N339 61 aa4.89□□□□□ -1.63
NOD1-205ENST00000419799 MT1LQ93083 61 aa4.88□□□□□ -1.63
NOD1-205ENST00000419799 V9GYY9 64 aa4.85□□□□□ -1.63
NOD1-205ENST00000419799 Q1T7F1 81 aa4.82□□□□□ -1.64
NOD1-205ENST00000419799 K7ERS5 55 aa4.81□□□□□ -1.64
NOD1-205ENST00000419799 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
NOD1-205ENST00000419799 SPRR5A0A1B0GTR4 108 aa4.77□□□□□ -1.65
NOD1-205ENST00000419799 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
NOD1-205ENST00000419799 A6NED7 52 aa4.73□□□□□ -1.65
NOD1-205ENST00000419799 KRTAP25-1Q3LHN0 102 aa4.73□□□□□ -1.65
NOD1-205ENST00000419799 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
NOD1-205ENST00000419799 PRAC1Q96KF2 57 aa4.62□□□□□ -1.67
NOD1-205ENST00000419799 RPS28P62857 69 aaKnown RBP4.59□□□□□ -1.67
NOD1-205ENST00000419799 CDC42SE1Q9NRR8 79 aa4.56□□□□□ -1.68
NOD1-205ENST00000419799 KRTAP5-5Q701N2 237 aaPredicted RBP4.55□□□□□ -1.68
NOD1-205ENST00000419799 KRTAP12-4P60329 112 aa4.54□□□□□ -1.68
NOD1-205ENST00000419799 ROMO1P60602 79 aa4.5□□□□□ -1.69
NOD1-205ENST00000419799 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
NOD1-205ENST00000419799 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.71
NOD1-205ENST00000419799 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
NOD1-205ENST00000419799 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
NOD1-205ENST00000419799 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
NOD1-205ENST00000419799 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
NOD1-205ENST00000419799 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.73
NOD1-205ENST00000419799 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
NOD1-205ENST00000419799 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
NOD1-205ENST00000419799 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
NOD1-205ENST00000419799 MUC5BQ9HC84 5762 aaPredicted RBP4.19□□□□□ -1.74
NOD1-205ENST00000419799 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
NOD1-205ENST00000419799 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
NOD1-205ENST00000419799 MT1AP04731 61 aa4.14□□□□□ -1.75
NOD1-205ENST00000419799 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
NOD1-205ENST00000419799 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
NOD1-205ENST00000419799 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
NOD1-205ENST00000419799 PRO0628Q9UI54 55 aa3.93□□□□□ -1.78
NOD1-205ENST00000419799 MT3P25713 68 aa3.9□□□□□ -1.79
NOD1-205ENST00000419799 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
NOD1-205ENST00000419799 LUZP6Q538Z0 58 aa3.67□□□□□ -1.82
NOD1-205ENST00000419799 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
NOD1-205ENST00000419799 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
NOD1-205ENST00000419799 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
NOD1-205ENST00000419799 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
NOD1-205ENST00000419799 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
NOD1-205ENST00000419799 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
NOD1-205ENST00000419799 PHGR1C9JFL3 82 aa3□□□□□ -1.93
NOD1-205ENST00000419799 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
NOD1-205ENST00000419799 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
NOD1-205ENST00000419799 INE1O15225 51 aa2.48□□□□□ -2.01
NOD1-205ENST00000419799 PRM1P04553 51 aa2.33□□□□□ -2.04
NOD1-205ENST00000419799 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
NOD1-205ENST00000419799 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 52.5 ms