RNA–Protein interactions for RNA: ENST00000419074.5

RCC1-206, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-206ENST00000419074 MDN1Q9NU22 5596 aa4.93□□□□□ -1.62
RCC1-206ENST00000419074 KRTAP4-12Q9BQ66 201 aa4.91□□□□□ -1.62
RCC1-206ENST00000419074 MT1EP04732 61 aa4.89□□□□□ -1.63
RCC1-206ENST00000419074 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
RCC1-206ENST00000419074 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
RCC1-206ENST00000419074 SPRR2EP22531 72 aa4.81□□□□□ -1.64
RCC1-206ENST00000419074 SPRR2BP35325 72 aa4.81□□□□□ -1.64
RCC1-206ENST00000419074 SPRR2AP35326 72 aa4.81□□□□□ -1.64
RCC1-206ENST00000419074 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
RCC1-206ENST00000419074 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
RCC1-206ENST00000419074 KRTAP9-4Q9BYQ2 154 aa4.79□□□□□ -1.64
RCC1-206ENST00000419074 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
RCC1-206ENST00000419074 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
RCC1-206ENST00000419074 KTN1-AS1Q86SY8 53 aa4.75□□□□□ -1.65
RCC1-206ENST00000419074 MT1LQ93083 61 aa4.75□□□□□ -1.65
RCC1-206ENST00000419074 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
RCC1-206ENST00000419074 MT1GP13640 62 aa4.71□□□□□ -1.66
RCC1-206ENST00000419074 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
RCC1-206ENST00000419074 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
RCC1-206ENST00000419074 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
RCC1-206ENST00000419074 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.67
RCC1-206ENST00000419074 LCE1DQ5T752 114 aa4.65□□□□□ -1.67
RCC1-206ENST00000419074 SPRR2DP22532 72 aa4.64□□□□□ -1.67
RCC1-206ENST00000419074 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
RCC1-206ENST00000419074 MT1MQ8N339 61 aa4.62□□□□□ -1.67
RCC1-206ENST00000419074 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
RCC1-206ENST00000419074 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
RCC1-206ENST00000419074 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
RCC1-206ENST00000419074 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
RCC1-206ENST00000419074 KRTAP2-1Q9BYU5 128 aa4.49□□□□□ -1.69
RCC1-206ENST00000419074 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
RCC1-206ENST00000419074 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
RCC1-206ENST00000419074 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
RCC1-206ENST00000419074 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
RCC1-206ENST00000419074 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
RCC1-206ENST00000419074 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
RCC1-206ENST00000419074 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
RCC1-206ENST00000419074 SPRR5A0A1B0GTR4 108 aa4.23□□□□□ -1.73
RCC1-206ENST00000419074 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
RCC1-206ENST00000419074 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
RCC1-206ENST00000419074 MT1AP04731 61 aa4.05□□□□□ -1.76
RCC1-206ENST00000419074 HMCN1Q96RW7 5635 aa4.04□□□□□ -1.76
RCC1-206ENST00000419074 MT4P47944 62 aa4.03□□□□□ -1.76
RCC1-206ENST00000419074 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
RCC1-206ENST00000419074 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
RCC1-206ENST00000419074 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
RCC1-206ENST00000419074 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
RCC1-206ENST00000419074 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
RCC1-206ENST00000419074 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
RCC1-206ENST00000419074 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
RCC1-206ENST00000419074 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
RCC1-206ENST00000419074 KRTAP6-2Q3LI66 62 aa3.73□□□□□ -1.81
RCC1-206ENST00000419074 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
RCC1-206ENST00000419074 MT3P25713 68 aa3.7□□□□□ -1.82
RCC1-206ENST00000419074 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
RCC1-206ENST00000419074 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
RCC1-206ENST00000419074 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
RCC1-206ENST00000419074 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
RCC1-206ENST00000419074 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
RCC1-206ENST00000419074 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
RCC1-206ENST00000419074 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
RCC1-206ENST00000419074 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
RCC1-206ENST00000419074 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
RCC1-206ENST00000419074 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
RCC1-206ENST00000419074 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
RCC1-206ENST00000419074 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
RCC1-206ENST00000419074 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
RCC1-206ENST00000419074 INE1O15225 51 aa3.01□□□□□ -1.93
RCC1-206ENST00000419074 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
RCC1-206ENST00000419074 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
RCC1-206ENST00000419074 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
RCC1-206ENST00000419074 PRM1P04553 51 aa2.67□□□□□ -1.98
RCC1-206ENST00000419074 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
RCC1-206ENST00000419074 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
RCC1-206ENST00000419074 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
RCC1-206ENST00000419074 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
RCC1-206ENST00000419074 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
RCC1-206ENST00000419074 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms