RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 PP632Q6XCG6 107 aa5.3□□□□□ -1.56
CHMP5-202ENST00000419016 KRTAP8-1Q8IUC2 63 aa5.25□□□□□ -1.57
CHMP5-202ENST00000419016 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
CHMP5-202ENST00000419016 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.58
CHMP5-202ENST00000419016 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.59
CHMP5-202ENST00000419016 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
CHMP5-202ENST00000419016 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
CHMP5-202ENST00000419016 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
CHMP5-202ENST00000419016 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
CHMP5-202ENST00000419016 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
CHMP5-202ENST00000419016 MT1EP04732 61 aa5.04□□□□□ -1.6
CHMP5-202ENST00000419016 KRTAP5-9P26371 169 aa5.03□□□□□ -1.6
CHMP5-202ENST00000419016 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
CHMP5-202ENST00000419016 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
CHMP5-202ENST00000419016 KRTAP6-3Q3LI67 103 aa4.97□□□□□ -1.61
CHMP5-202ENST00000419016 MUC12Q9UKN1 5478 aa4.94□□□□□ -1.62
CHMP5-202ENST00000419016 MT1LQ93083 61 aa4.93□□□□□ -1.62
CHMP5-202ENST00000419016 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
CHMP5-202ENST00000419016 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
CHMP5-202ENST00000419016 MDN1Q9NU22 5596 aa4.82□□□□□ -1.64
CHMP5-202ENST00000419016 MT1GP13640 62 aa4.81□□□□□ -1.64
CHMP5-202ENST00000419016 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
CHMP5-202ENST00000419016 SPRR2EP22531 72 aa4.75□□□□□ -1.65
CHMP5-202ENST00000419016 SPRR2BP35325 72 aa4.75□□□□□ -1.65
CHMP5-202ENST00000419016 SPRR2AP35326 72 aa4.75□□□□□ -1.65
CHMP5-202ENST00000419016 MT1MQ8N339 61 aa4.75□□□□□ -1.65
CHMP5-202ENST00000419016 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
CHMP5-202ENST00000419016 NEBP20929 6669 aa4.66□□□□□ -1.66
CHMP5-202ENST00000419016 KRTAP4-3Q9BYR4 195 aa4.65□□□□□ -1.67
CHMP5-202ENST00000419016 SPRR2DP22532 72 aa4.58□□□□□ -1.68
CHMP5-202ENST00000419016 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
CHMP5-202ENST00000419016 DSTQ03001 7570 aaKnown RBP4.53□□□□□ -1.68
CHMP5-202ENST00000419016 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
CHMP5-202ENST00000419016 KRTAP2-3P0C7H8 128 aa4.35□□□□□ -1.71
CHMP5-202ENST00000419016 KRTAP2-4Q9BYR9 128 aa4.35□□□□□ -1.71
CHMP5-202ENST00000419016 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
CHMP5-202ENST00000419016 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
CHMP5-202ENST00000419016 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
CHMP5-202ENST00000419016 KRTAP2-1Q9BYU5 128 aa4.25□□□□□ -1.73
CHMP5-202ENST00000419016 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
CHMP5-202ENST00000419016 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
CHMP5-202ENST00000419016 MT1AP04731 61 aa4.18□□□□□ -1.74
CHMP5-202ENST00000419016 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
CHMP5-202ENST00000419016 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.13□□□□□ -1.75
CHMP5-202ENST00000419016 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
CHMP5-202ENST00000419016 MT3P25713 68 aa4.04□□□□□ -1.76
CHMP5-202ENST00000419016 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
CHMP5-202ENST00000419016 MT4P47944 62 aa3.98□□□□□ -1.77
CHMP5-202ENST00000419016 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.78
CHMP5-202ENST00000419016 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
CHMP5-202ENST00000419016 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
CHMP5-202ENST00000419016 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
CHMP5-202ENST00000419016 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
CHMP5-202ENST00000419016 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
CHMP5-202ENST00000419016 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
CHMP5-202ENST00000419016 INE1O15225 51 aa3.49□□□□□ -1.85
CHMP5-202ENST00000419016 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
CHMP5-202ENST00000419016 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
CHMP5-202ENST00000419016 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
CHMP5-202ENST00000419016 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
CHMP5-202ENST00000419016 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
CHMP5-202ENST00000419016 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
CHMP5-202ENST00000419016 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
CHMP5-202ENST00000419016 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
CHMP5-202ENST00000419016 GPR98Q8WXG9 6306 aa3.26□□□□□ -1.89
CHMP5-202ENST00000419016 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
CHMP5-202ENST00000419016 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
CHMP5-202ENST00000419016 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
CHMP5-202ENST00000419016 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
CHMP5-202ENST00000419016 PRM1P04553 51 aa2.95□□□□□ -1.94
CHMP5-202ENST00000419016 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
CHMP5-202ENST00000419016 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
CHMP5-202ENST00000419016 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
CHMP5-202ENST00000419016 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
CHMP5-202ENST00000419016 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
CHMP5-202ENST00000419016 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
CHMP5-202ENST00000419016 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 73.3 ms