RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 V9GYY9 64 aa5.29□□□□□ -1.56
TMEM248-203ENST00000418375 LCE1AQ5T7P2 110 aa5.27□□□□□ -1.57
TMEM248-203ENST00000418375 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
TMEM248-203ENST00000418375 Q1T7F1 81 aa5.23□□□□□ -1.57
TMEM248-203ENST00000418375 PSPHP1O15172 72 aa5.19□□□□□ -1.58
TMEM248-203ENST00000418375 SPRR2DP22532 72 aa5.19□□□□□ -1.58
TMEM248-203ENST00000418375 KRTAP2-2Q9BYT5 123 aa5.19□□□□□ -1.58
TMEM248-203ENST00000418375 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
TMEM248-203ENST00000418375 MIR22HGQ0VDD5 57 aa5.18□□□□□ -1.58
TMEM248-203ENST00000418375 RPS28P62857 69 aaKnown RBP5.16□□□□□ -1.58
TMEM248-203ENST00000418375 K7ERS5 55 aa5.08□□□□□ -1.6
TMEM248-203ENST00000418375 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
TMEM248-203ENST00000418375 TNP1P09430 55 aa5.07□□□□□ -1.6
TMEM248-203ENST00000418375 A6NED7 52 aa5.05□□□□□ -1.6
TMEM248-203ENST00000418375 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
TMEM248-203ENST00000418375 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
TMEM248-203ENST00000418375 MT1EP04732 61 aa4.94□□□□□ -1.62
TMEM248-203ENST00000418375 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
TMEM248-203ENST00000418375 LCE3AQ5TA76 89 aa4.93□□□□□ -1.62
TMEM248-203ENST00000418375 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
TMEM248-203ENST00000418375 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
TMEM248-203ENST00000418375 CDC42SE1Q9NRR8 79 aa4.85□□□□□ -1.63
TMEM248-203ENST00000418375 DSTQ03001 7570 aaKnown RBP4.84□□□□□ -1.63
TMEM248-203ENST00000418375 MT1GP13640 62 aa4.78□□□□□ -1.64
TMEM248-203ENST00000418375 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
TMEM248-203ENST00000418375 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
TMEM248-203ENST00000418375 MT1LQ93083 61 aa4.75□□□□□ -1.65
TMEM248-203ENST00000418375 ROMO1P60602 79 aa4.74□□□□□ -1.65
TMEM248-203ENST00000418375 GPR98Q8WXG9 6306 aa4.73□□□□□ -1.65
TMEM248-203ENST00000418375 MT1MQ8N339 61 aa4.68□□□□□ -1.66
TMEM248-203ENST00000418375 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
TMEM248-203ENST00000418375 MT4P47944 62 aa4.54□□□□□ -1.68
TMEM248-203ENST00000418375 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
TMEM248-203ENST00000418375 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
TMEM248-203ENST00000418375 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
TMEM248-203ENST00000418375 PRAC1Q96KF2 57 aa4.43□□□□□ -1.7
TMEM248-203ENST00000418375 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.71
TMEM248-203ENST00000418375 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.71
TMEM248-203ENST00000418375 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
TMEM248-203ENST00000418375 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
TMEM248-203ENST00000418375 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
TMEM248-203ENST00000418375 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
TMEM248-203ENST00000418375 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
TMEM248-203ENST00000418375 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
TMEM248-203ENST00000418375 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
TMEM248-203ENST00000418375 KRTAP5-7Q6L8G8 165 aa4.18□□□□□ -1.74
TMEM248-203ENST00000418375 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
TMEM248-203ENST00000418375 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
TMEM248-203ENST00000418375 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.75
TMEM248-203ENST00000418375 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
TMEM248-203ENST00000418375 MT1AP04731 61 aa4.06□□□□□ -1.76
TMEM248-203ENST00000418375 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
TMEM248-203ENST00000418375 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
TMEM248-203ENST00000418375 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
TMEM248-203ENST00000418375 KTN1-AS1Q86SY8 53 aa3.95□□□□□ -1.78
TMEM248-203ENST00000418375 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
TMEM248-203ENST00000418375 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
TMEM248-203ENST00000418375 MT3P25713 68 aa3.77□□□□□ -1.81
TMEM248-203ENST00000418375 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
TMEM248-203ENST00000418375 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
TMEM248-203ENST00000418375 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
TMEM248-203ENST00000418375 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
TMEM248-203ENST00000418375 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
TMEM248-203ENST00000418375 MUC5ACP98088 5654 aa3.65□□□□□ -1.83
TMEM248-203ENST00000418375 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
TMEM248-203ENST00000418375 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
TMEM248-203ENST00000418375 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
TMEM248-203ENST00000418375 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
TMEM248-203ENST00000418375 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
TMEM248-203ENST00000418375 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
TMEM248-203ENST00000418375 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
TMEM248-203ENST00000418375 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
TMEM248-203ENST00000418375 PHGR1C9JFL3 82 aa2.54□□□□□ -2
TMEM248-203ENST00000418375 INE1O15225 51 aa2.43□□□□□ -2.02
TMEM248-203ENST00000418375 PRM1P04553 51 aa2.42□□□□□ -2.02
TMEM248-203ENST00000418375 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
TMEM248-203ENST00000418375 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
TMEM248-203ENST00000418375 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms