RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
TM9SF4-203ENST00000417389 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
TM9SF4-203ENST00000417389 KRTAP25-1Q3LHN0 102 aa4.03□□□□□ -1.76
TM9SF4-203ENST00000417389 BRK1Q8WUW1 75 aa4.03□□□□□ -1.76
TM9SF4-203ENST00000417389 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
TM9SF4-203ENST00000417389 ROMO1P60602 79 aa4□□□□□ -1.77
TM9SF4-203ENST00000417389 PP632Q6XCG6 107 aa3.98□□□□□ -1.77
TM9SF4-203ENST00000417389 MT1GP13640 62 aa3.96□□□□□ -1.78
TM9SF4-203ENST00000417389 LOC100996750A0A140TA64 210 aa3.93□□□□□ -1.78
TM9SF4-203ENST00000417389 MT1LQ93083 61 aa3.93□□□□□ -1.78
TM9SF4-203ENST00000417389 KRTAP4-6Q9BYQ5 205 aa3.93□□□□□ -1.78
TM9SF4-203ENST00000417389 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
TM9SF4-203ENST00000417389 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
TM9SF4-203ENST00000417389 MT1MQ8N339 61 aa3.89□□□□□ -1.79
TM9SF4-203ENST00000417389 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
TM9SF4-203ENST00000417389 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
TM9SF4-203ENST00000417389 PMAIP1Q13794 54 aa3.78□□□□□ -1.8
TM9SF4-203ENST00000417389 KRTAP4-9Q9BYQ8 210 aa3.78□□□□□ -1.8
TM9SF4-203ENST00000417389 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
TM9SF4-203ENST00000417389 PRO0628Q9UI54 55 aa3.75□□□□□ -1.81
TM9SF4-203ENST00000417389 MT4P47944 62 aa3.7□□□□□ -1.82
TM9SF4-203ENST00000417389 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
TM9SF4-203ENST00000417389 KRTAP15-1Q3LI76 137 aa3.69□□□□□ -1.82
TM9SF4-203ENST00000417389 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
TM9SF4-203ENST00000417389 KRTAP19-4Q3LI73 84 aa3.63□□□□□ -1.83
TM9SF4-203ENST00000417389 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
TM9SF4-203ENST00000417389 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
TM9SF4-203ENST00000417389 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
TM9SF4-203ENST00000417389 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
TM9SF4-203ENST00000417389 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
TM9SF4-203ENST00000417389 KTN1-AS1Q86SY8 53 aa3.54□□□□□ -1.84
TM9SF4-203ENST00000417389 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
TM9SF4-203ENST00000417389 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
TM9SF4-203ENST00000417389 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
TM9SF4-203ENST00000417389 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
TM9SF4-203ENST00000417389 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
TM9SF4-203ENST00000417389 KRTAP9-4Q9BYQ2 154 aa3.43□□□□□ -1.86
TM9SF4-203ENST00000417389 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
TM9SF4-203ENST00000417389 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
TM9SF4-203ENST00000417389 SVIPQ8NHG7 77 aa3.38□□□□□ -1.87
TM9SF4-203ENST00000417389 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
TM9SF4-203ENST00000417389 MT1AP04731 61 aa3.35□□□□□ -1.87
TM9SF4-203ENST00000417389 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
TM9SF4-203ENST00000417389 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
TM9SF4-203ENST00000417389 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
TM9SF4-203ENST00000417389 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
TM9SF4-203ENST00000417389 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
TM9SF4-203ENST00000417389 KRTAP5-7Q6L8G8 165 aa3.17□□□□□ -1.9
TM9SF4-203ENST00000417389 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
TM9SF4-203ENST00000417389 H3BS24 57 aa3.14□□□□□ -1.91
TM9SF4-203ENST00000417389 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
TM9SF4-203ENST00000417389 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
TM9SF4-203ENST00000417389 MT3P25713 68 aa3.08□□□□□ -1.92
TM9SF4-203ENST00000417389 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
TM9SF4-203ENST00000417389 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
TM9SF4-203ENST00000417389 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
TM9SF4-203ENST00000417389 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
TM9SF4-203ENST00000417389 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
TM9SF4-203ENST00000417389 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
TM9SF4-203ENST00000417389 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
TM9SF4-203ENST00000417389 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
TM9SF4-203ENST00000417389 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
TM9SF4-203ENST00000417389 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
TM9SF4-203ENST00000417389 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
TM9SF4-203ENST00000417389 LCE1CQ5T751 118 aa2.56□□□□□ -2
TM9SF4-203ENST00000417389 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
TM9SF4-203ENST00000417389 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
TM9SF4-203ENST00000417389 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
TM9SF4-203ENST00000417389 A0A0A0MQY5 61 aa2.29□□□□□ -2.04
TM9SF4-203ENST00000417389 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
TM9SF4-203ENST00000417389 INE1O15225 51 aa2.2□□□□□ -2.06
TM9SF4-203ENST00000417389 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
TM9SF4-203ENST00000417389 PRM1P04553 51 aa2.06□□□□□ -2.08
TM9SF4-203ENST00000417389 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
TM9SF4-203ENST00000417389 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
TM9SF4-203ENST00000417389 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
TM9SF4-203ENST00000417389 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
TM9SF4-203ENST00000417389 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 213.3 ms