RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
GABRE-202ENST00000417300 TNP1P09430 55 aa4.8□□□□□ -1.64
GABRE-202ENST00000417300 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
GABRE-202ENST00000417300 LCE1AQ5T7P2 110 aa4.78□□□□□ -1.64
GABRE-202ENST00000417300 DSTQ03001 7570 aaKnown RBP4.73□□□□□ -1.65
GABRE-202ENST00000417300 PRAC1Q96KF2 57 aa4.73□□□□□ -1.65
GABRE-202ENST00000417300 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
GABRE-202ENST00000417300 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
GABRE-202ENST00000417300 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
GABRE-202ENST00000417300 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
GABRE-202ENST00000417300 KRTAP10-12P60413 245 aa4.68□□□□□ -1.66
GABRE-202ENST00000417300 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
GABRE-202ENST00000417300 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.67
GABRE-202ENST00000417300 PP632Q6XCG6 107 aa4.65□□□□□ -1.67
GABRE-202ENST00000417300 AHNAK2Q8IVF2 5795 aa4.62□□□□□ -1.67
GABRE-202ENST00000417300 HMCN1Q96RW7 5635 aa4.61□□□□□ -1.67
GABRE-202ENST00000417300 LCE3AQ5TA76 89 aa4.6□□□□□ -1.67
GABRE-202ENST00000417300 KRTAP8-1Q8IUC2 63 aa4.57□□□□□ -1.68
GABRE-202ENST00000417300 KRTAP5-10Q6L8G5 202 aa4.55□□□□□ -1.68
GABRE-202ENST00000417300 SPRR5A0A1B0GTR4 108 aa4.52□□□□□ -1.69
GABRE-202ENST00000417300 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
GABRE-202ENST00000417300 KRTAP5-7Q6L8G8 165 aa4.5□□□□□ -1.69
GABRE-202ENST00000417300 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
GABRE-202ENST00000417300 KRTAP12-3P60328 96 aa4.42□□□□□ -1.7
GABRE-202ENST00000417300 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
GABRE-202ENST00000417300 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
GABRE-202ENST00000417300 H3BS24 57 aa4.36□□□□□ -1.71
GABRE-202ENST00000417300 MT1EP04732 61 aa4.33□□□□□ -1.72
GABRE-202ENST00000417300 KRTAP15-1Q3LI76 137 aa4.33□□□□□ -1.72
GABRE-202ENST00000417300 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
GABRE-202ENST00000417300 MT4P47944 62 aa4.31□□□□□ -1.72
GABRE-202ENST00000417300 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
GABRE-202ENST00000417300 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
GABRE-202ENST00000417300 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
GABRE-202ENST00000417300 MT1LQ93083 61 aa4.23□□□□□ -1.73
GABRE-202ENST00000417300 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
GABRE-202ENST00000417300 KRTAP19-3Q7Z4W3 81 aa4.18□□□□□ -1.74
GABRE-202ENST00000417300 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
GABRE-202ENST00000417300 MT1GP13640 62 aa4.13□□□□□ -1.75
GABRE-202ENST00000417300 AHNAKQ09666 5890 aaKnown RBP4.13□□□□□ -1.75
GABRE-202ENST00000417300 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
GABRE-202ENST00000417300 MT1MQ8N339 61 aa4.08□□□□□ -1.76
GABRE-202ENST00000417300 MUC5ACP98088 5654 aa3.96□□□□□ -1.77
GABRE-202ENST00000417300 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
GABRE-202ENST00000417300 MUC5BQ9HC84 5762 aaPredicted RBP3.94□□□□□ -1.78
GABRE-202ENST00000417300 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
GABRE-202ENST00000417300 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
GABRE-202ENST00000417300 LUZP6Q538Z0 58 aa3.88□□□□□ -1.79
GABRE-202ENST00000417300 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
GABRE-202ENST00000417300 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
GABRE-202ENST00000417300 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
GABRE-202ENST00000417300 KRTAP5-5Q701N2 237 aaPredicted RBP3.7□□□□□ -1.82
GABRE-202ENST00000417300 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
GABRE-202ENST00000417300 MT1AP04731 61 aa3.61□□□□□ -1.83
GABRE-202ENST00000417300 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
GABRE-202ENST00000417300 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
GABRE-202ENST00000417300 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
GABRE-202ENST00000417300 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
GABRE-202ENST00000417300 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
GABRE-202ENST00000417300 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
GABRE-202ENST00000417300 MT3P25713 68 aa3.26□□□□□ -1.89
GABRE-202ENST00000417300 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
GABRE-202ENST00000417300 INE1O15225 51 aa3.11□□□□□ -1.91
GABRE-202ENST00000417300 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
GABRE-202ENST00000417300 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
GABRE-202ENST00000417300 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
GABRE-202ENST00000417300 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
GABRE-202ENST00000417300 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
GABRE-202ENST00000417300 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
GABRE-202ENST00000417300 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
GABRE-202ENST00000417300 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
GABRE-202ENST00000417300 PRM1P04553 51 aa2.57□□□□□ -2
GABRE-202ENST00000417300 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
GABRE-202ENST00000417300 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
GABRE-202ENST00000417300 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
GABRE-202ENST00000417300 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
GABRE-202ENST00000417300 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
GABRE-202ENST00000417300 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 7 ms