RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 SPRR2FQ96RM1 72 aa6.1□□□□□ -1.43
CALD1-204ENST00000417172 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.08□□□□□ -1.44
CALD1-204ENST00000417172 MT1LQ93083 61 aa6.05□□□□□ -1.44
CALD1-204ENST00000417172 KRTAP5-9P26371 169 aa5.97□□□□□ -1.45
CALD1-204ENST00000417172 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.46
CALD1-204ENST00000417172 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
CALD1-204ENST00000417172 KRTAP19-3Q7Z4W3 81 aa5.91□□□□□ -1.46
CALD1-204ENST00000417172 MDN1Q9NU22 5596 aa5.91□□□□□ -1.46
CALD1-204ENST00000417172 KRTAP6-3Q3LI67 103 aa5.87□□□□□ -1.47
CALD1-204ENST00000417172 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
CALD1-204ENST00000417172 MT1GP13640 62 aa5.82□□□□□ -1.48
CALD1-204ENST00000417172 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
CALD1-204ENST00000417172 MT1MQ8N339 61 aa5.82□□□□□ -1.48
CALD1-204ENST00000417172 KRTAP4-3Q9BYR4 195 aa5.81□□□□□ -1.48
CALD1-204ENST00000417172 SPRR2EP22531 72 aa5.78□□□□□ -1.48
CALD1-204ENST00000417172 SPRR2BP35325 72 aa5.78□□□□□ -1.48
CALD1-204ENST00000417172 SPRR2AP35326 72 aa5.78□□□□□ -1.48
CALD1-204ENST00000417172 KRTAP9-7A8MTY7 169 aa5.74□□□□□ -1.49
CALD1-204ENST00000417172 KRTAP19-4Q3LI73 84 aa5.74□□□□□ -1.49
CALD1-204ENST00000417172 DSTQ03001 7570 aaKnown RBP5.72□□□□□ -1.49
CALD1-204ENST00000417172 KRTAP9-6A8MVA2 160 aa5.7□□□□□ -1.5
CALD1-204ENST00000417172 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
CALD1-204ENST00000417172 NEBP20929 6669 aa5.56□□□□□ -1.52
CALD1-204ENST00000417172 SPRR2DP22532 72 aa5.56□□□□□ -1.52
CALD1-204ENST00000417172 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
CALD1-204ENST00000417172 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
CALD1-204ENST00000417172 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.58
CALD1-204ENST00000417172 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.58
CALD1-204ENST00000417172 KRTAP2-1Q9BYU5 128 aa5.15□□□□□ -1.58
CALD1-204ENST00000417172 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
CALD1-204ENST00000417172 MT1AP04731 61 aa5.1□□□□□ -1.59
CALD1-204ENST00000417172 KRTAP20-1Q3LI63 56 aa5.07□□□□□ -1.6
CALD1-204ENST00000417172 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
CALD1-204ENST00000417172 KRTAP2-2Q9BYT5 123 aa5.01□□□□□ -1.61
CALD1-204ENST00000417172 KRTAP4-6Q9BYQ5 205 aa5□□□□□ -1.61
CALD1-204ENST00000417172 KRTAP5-4Q6L8H1 288 aa4.99□□□□□ -1.61
CALD1-204ENST00000417172 MT4P47944 62 aa4.89□□□□□ -1.63
CALD1-204ENST00000417172 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
CALD1-204ENST00000417172 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
CALD1-204ENST00000417172 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
CALD1-204ENST00000417172 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
CALD1-204ENST00000417172 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
CALD1-204ENST00000417172 HMCN1Q96RW7 5635 aa4.74□□□□□ -1.65
CALD1-204ENST00000417172 KRTAP6-2Q3LI66 62 aa4.73□□□□□ -1.65
CALD1-204ENST00000417172 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
CALD1-204ENST00000417172 MT3P25713 68 aa4.6□□□□□ -1.67
CALD1-204ENST00000417172 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
CALD1-204ENST00000417172 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
CALD1-204ENST00000417172 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
CALD1-204ENST00000417172 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
CALD1-204ENST00000417172 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
CALD1-204ENST00000417172 KRTAP4-12Q9BQ66 201 aa4.2□□□□□ -1.74
CALD1-204ENST00000417172 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
CALD1-204ENST00000417172 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
CALD1-204ENST00000417172 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
CALD1-204ENST00000417172 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
CALD1-204ENST00000417172 GPR98Q8WXG9 6306 aa3.97□□□□□ -1.77
CALD1-204ENST00000417172 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
CALD1-204ENST00000417172 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
CALD1-204ENST00000417172 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
CALD1-204ENST00000417172 PRM1P04553 51 aa3.91□□□□□ -1.78
CALD1-204ENST00000417172 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
CALD1-204ENST00000417172 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
CALD1-204ENST00000417172 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
CALD1-204ENST00000417172 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
CALD1-204ENST00000417172 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
CALD1-204ENST00000417172 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.85
CALD1-204ENST00000417172 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
CALD1-204ENST00000417172 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
CALD1-204ENST00000417172 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
CALD1-204ENST00000417172 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
CALD1-204ENST00000417172 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
CALD1-204ENST00000417172 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
CALD1-204ENST00000417172 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
CALD1-204ENST00000417172 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
CALD1-204ENST00000417172 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
CALD1-204ENST00000417172 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 71.9 ms