RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 PRO2289Q9P1D8 64 aa2.44□□□□□ -2.02
ATG4AP1-201ENST00000416893 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
ATG4AP1-201ENST00000416893 MT1HP80294 61 aa2.43□□□□□ -2.02
ATG4AP1-201ENST00000416893 PLAC4Q8WY50 150 aa2.41□□□□□ -2.02
ATG4AP1-201ENST00000416893 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
ATG4AP1-201ENST00000416893 M0R2T5 61 aa2.38□□□□□ -2.03
ATG4AP1-201ENST00000416893 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
ATG4AP1-201ENST00000416893 FSIP2Q5CZC0 6907 aa2.38□□□□□ -2.03
ATG4AP1-201ENST00000416893 INE1O15225 51 aa2.35□□□□□ -2.03
ATG4AP1-201ENST00000416893 USH2AO75445 5202 aa2.35□□□□□ -2.03
ATG4AP1-201ENST00000416893 SSPOA2VEC9 5147 aa2.35□□□□□ -2.03
ATG4AP1-201ENST00000416893 C10orf95Q9H7T3 257 aa2.31□□□□□ -2.04
ATG4AP1-201ENST00000416893 R4GN34 69 aa2.29□□□□□ -2.04
ATG4AP1-201ENST00000416893 MT2AP02795 61 aa2.28□□□□□ -2.04
ATG4AP1-201ENST00000416893 MT1FP04733 61 aa2.27□□□□□ -2.05
ATG4AP1-201ENST00000416893 FCGBPQ9Y6R7 5405 aaPredicted RBP2.26□□□□□ -2.05
ATG4AP1-201ENST00000416893 S4R3F8 94 aa2.26□□□□□ -2.05
ATG4AP1-201ENST00000416893 KRTAP10-10P60014 251 aa2.25□□□□□ -2.05
ATG4AP1-201ENST00000416893 CRCT1Q9UGL9 99 aa2.25□□□□□ -2.05
ATG4AP1-201ENST00000416893 SPRR5A0A1B0GTR4 108 aa2.21□□□□□ -2.06
ATG4AP1-201ENST00000416893 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
ATG4AP1-201ENST00000416893 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
ATG4AP1-201ENST00000416893 A0A0D9SG42 100 aa2.17□□□□□ -2.06
ATG4AP1-201ENST00000416893 M0QZ58 72 aa2.17□□□□□ -2.06
ATG4AP1-201ENST00000416893 KRTAP12-1P59990 96 aa2.17□□□□□ -2.06
ATG4AP1-201ENST00000416893 KRTAP13-4Q3LI77 160 aa2.17□□□□□ -2.06
ATG4AP1-201ENST00000416893 MACF1Q9UPN3 7388 aaKnown RBP2.14□□□□□ -2.07
ATG4AP1-201ENST00000416893 KRTAP19-6Q3LI70 58 aa2.12□□□□□ -2.07
ATG4AP1-201ENST00000416893 SPRR2GQ9BYE4 73 aa2.11□□□□□ -2.07
ATG4AP1-201ENST00000416893 MT1BP07438 61 aa2.1□□□□□ -2.07
ATG4AP1-201ENST00000416893 KRTAP19-8Q3LI54 63 aa2.1□□□□□ -2.07
ATG4AP1-201ENST00000416893 SYNE2Q8WXH0 6885 aaKnown RBP2.09□□□□□ -2.08
ATG4AP1-201ENST00000416893 MUC12Q9UKN1 5478 aa2.07□□□□□ -2.08
ATG4AP1-201ENST00000416893 MDN1Q9NU22 5596 aa2.06□□□□□ -2.08
ATG4AP1-201ENST00000416893 KMT2DO14686 5537 aa2.05□□□□□ -2.08
ATG4AP1-201ENST00000416893 MT1XP80297 61 aa1.98□□□□□ -2.09
ATG4AP1-201ENST00000416893 NEBP20929 6669 aa1.98□□□□□ -2.09
ATG4AP1-201ENST00000416893 KRTAP6-3Q3LI67 103 aa1.97□□□□□ -2.09
ATG4AP1-201ENST00000416893 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
ATG4AP1-201ENST00000416893 TNP1P09430 55 aa1.91□□□□□ -2.1
ATG4AP1-201ENST00000416893 KRTAP8-1Q8IUC2 63 aa1.87□□□□□ -2.11
ATG4AP1-201ENST00000416893 SPRR2FQ96RM1 72 aa1.87□□□□□ -2.11
ATG4AP1-201ENST00000416893 SPRR2EP22531 72 aa1.83□□□□□ -2.12
ATG4AP1-201ENST00000416893 SPRR2BP35325 72 aa1.83□□□□□ -2.12
ATG4AP1-201ENST00000416893 SPRR2AP35326 72 aa1.83□□□□□ -2.12
ATG4AP1-201ENST00000416893 KRTAP20-1Q3LI63 56 aa1.8□□□□□ -2.12
ATG4AP1-201ENST00000416893 SPRR2DP22532 72 aa1.77□□□□□ -2.13
ATG4AP1-201ENST00000416893 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
ATG4AP1-201ENST00000416893 KRTAP2-3P0C7H8 128 aa1.76□□□□□ -2.13
ATG4AP1-201ENST00000416893 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
ATG4AP1-201ENST00000416893 KRTAP2-4Q9BYR9 128 aa1.76□□□□□ -2.13
ATG4AP1-201ENST00000416893 MT1EP04732 61 aa1.75□□□□□ -2.13
ATG4AP1-201ENST00000416893 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
ATG4AP1-201ENST00000416893 KRTAP19-3Q7Z4W3 81 aa1.72□□□□□ -2.13
ATG4AP1-201ENST00000416893 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
ATG4AP1-201ENST00000416893 KRTAP2-1Q9BYU5 128 aa1.71□□□□□ -2.14
ATG4AP1-201ENST00000416893 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
ATG4AP1-201ENST00000416893 KRTAP12-3P60328 96 aa1.7□□□□□ -2.14
ATG4AP1-201ENST00000416893 MT1LQ93083 61 aa1.68□□□□□ -2.14
ATG4AP1-201ENST00000416893 MT1GP13640 62 aa1.67□□□□□ -2.14
ATG4AP1-201ENST00000416893 MT1MQ8N339 61 aa1.66□□□□□ -2.14
ATG4AP1-201ENST00000416893 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
ATG4AP1-201ENST00000416893 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
ATG4AP1-201ENST00000416893 SYNE1Q8NF91 8797 aaKnown RBP1.55□□□□□ -2.16
ATG4AP1-201ENST00000416893 MT4P47944 62 aa1.54□□□□□ -2.16
ATG4AP1-201ENST00000416893 KRTAP20-2Q3LI61 65 aa1.46□□□□□ -2.18
ATG4AP1-201ENST00000416893 MT1AP04731 61 aa1.43□□□□□ -2.18
ATG4AP1-201ENST00000416893 KRTAP6-1Q3LI64 71 aa1.43□□□□□ -2.18
ATG4AP1-201ENST00000416893 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
ATG4AP1-201ENST00000416893 MUC5ACP98088 5654 aa1.37□□□□□ -2.19
ATG4AP1-201ENST00000416893 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
ATG4AP1-201ENST00000416893 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
ATG4AP1-201ENST00000416893 PRM1P04553 51 aa1.34□□□□□ -2.19
ATG4AP1-201ENST00000416893 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
ATG4AP1-201ENST00000416893 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
ATG4AP1-201ENST00000416893 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
ATG4AP1-201ENST00000416893 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 1100.7 ms