RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
SMPD4P1-201ENST00000416717 MT1LQ93083 61 aa3.78□□□□□ -1.8
SMPD4P1-201ENST00000416717 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
SMPD4P1-201ENST00000416717 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
SMPD4P1-201ENST00000416717 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
SMPD4P1-201ENST00000416717 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
SMPD4P1-201ENST00000416717 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
SMPD4P1-201ENST00000416717 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
SMPD4P1-201ENST00000416717 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
SMPD4P1-201ENST00000416717 MT1GP13640 62 aa3.61□□□□□ -1.83
SMPD4P1-201ENST00000416717 MT1MQ8N339 61 aa3.61□□□□□ -1.83
SMPD4P1-201ENST00000416717 KRTAP19-4Q3LI73 84 aa3.6□□□□□ -1.83
SMPD4P1-201ENST00000416717 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
SMPD4P1-201ENST00000416717 KRTAP5-9P26371 169 aa3.59□□□□□ -1.84
SMPD4P1-201ENST00000416717 LCE5AQ5TCM9 118 aa3.58□□□□□ -1.84
SMPD4P1-201ENST00000416717 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
SMPD4P1-201ENST00000416717 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
SMPD4P1-201ENST00000416717 SPRR2EP22531 72 aa3.53□□□□□ -1.85
SMPD4P1-201ENST00000416717 SPRR2BP35325 72 aa3.53□□□□□ -1.85
SMPD4P1-201ENST00000416717 SPRR2AP35326 72 aa3.53□□□□□ -1.85
SMPD4P1-201ENST00000416717 KRTAP9-7A8MTY7 169 aa3.49□□□□□ -1.85
SMPD4P1-201ENST00000416717 KRTAP6-3Q3LI67 103 aa3.49□□□□□ -1.85
SMPD4P1-201ENST00000416717 SPRR2DP22532 72 aa3.39□□□□□ -1.87
SMPD4P1-201ENST00000416717 KRTAP2-3P0C7H8 128 aa3.31□□□□□ -1.88
SMPD4P1-201ENST00000416717 KRTAP2-4Q9BYR9 128 aa3.31□□□□□ -1.88
SMPD4P1-201ENST00000416717 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
SMPD4P1-201ENST00000416717 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
SMPD4P1-201ENST00000416717 NEBP20929 6669 aa3.29□□□□□ -1.88
SMPD4P1-201ENST00000416717 LCE3BQ5TA77 95 aa3.24□□□□□ -1.89
SMPD4P1-201ENST00000416717 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
SMPD4P1-201ENST00000416717 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
SMPD4P1-201ENST00000416717 MT1AP04731 61 aa3.18□□□□□ -1.9
SMPD4P1-201ENST00000416717 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
SMPD4P1-201ENST00000416717 KRTAP20-1Q3LI63 56 aa3.08□□□□□ -1.92
SMPD4P1-201ENST00000416717 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
SMPD4P1-201ENST00000416717 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.92
SMPD4P1-201ENST00000416717 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
SMPD4P1-201ENST00000416717 MT4P47944 62 aa2.99□□□□□ -1.93
SMPD4P1-201ENST00000416717 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
SMPD4P1-201ENST00000416717 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
SMPD4P1-201ENST00000416717 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
SMPD4P1-201ENST00000416717 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
SMPD4P1-201ENST00000416717 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
SMPD4P1-201ENST00000416717 MT3P25713 68 aa2.88□□□□□ -1.95
SMPD4P1-201ENST00000416717 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
SMPD4P1-201ENST00000416717 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
SMPD4P1-201ENST00000416717 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
SMPD4P1-201ENST00000416717 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
SMPD4P1-201ENST00000416717 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
SMPD4P1-201ENST00000416717 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
SMPD4P1-201ENST00000416717 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
SMPD4P1-201ENST00000416717 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
SMPD4P1-201ENST00000416717 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
SMPD4P1-201ENST00000416717 PRM1P04553 51 aa2.68□□□□□ -1.98
SMPD4P1-201ENST00000416717 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
SMPD4P1-201ENST00000416717 KRTAP9-9Q9BYP9 154 aa2.5□□□□□ -2.01
SMPD4P1-201ENST00000416717 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
SMPD4P1-201ENST00000416717 KRTAP4-11Q9BYQ6 195 aa2.45□□□□□ -2.02
SMPD4P1-201ENST00000416717 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
SMPD4P1-201ENST00000416717 MUC5ACP98088 5654 aa2.4□□□□□ -2.02
SMPD4P1-201ENST00000416717 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
SMPD4P1-201ENST00000416717 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
SMPD4P1-201ENST00000416717 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
SMPD4P1-201ENST00000416717 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
SMPD4P1-201ENST00000416717 KRTAP4-2Q9BYR5 136 aa2.32□□□□□ -2.04
SMPD4P1-201ENST00000416717 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
SMPD4P1-201ENST00000416717 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
SMPD4P1-201ENST00000416717 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
SMPD4P1-201ENST00000416717 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
SMPD4P1-201ENST00000416717 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
SMPD4P1-201ENST00000416717 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
SMPD4P1-201ENST00000416717 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
SMPD4P1-201ENST00000416717 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
SMPD4P1-201ENST00000416717 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
SMPD4P1-201ENST00000416717 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
SMPD4P1-201ENST00000416717 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
SMPD4P1-201ENST00000416717 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 80 ms