RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 SPTSSBQ8NFR3 76 aa3.75□□□□□ -1.81
MDC1-202ENST00000416571 MT1EP04732 61 aa3.74□□□□□ -1.81
MDC1-202ENST00000416571 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
MDC1-202ENST00000416571 H7BZZ5 65 aa3.73□□□□□ -1.81
MDC1-202ENST00000416571 ACYP2P14621 99 aa3.71□□□□□ -1.82
MDC1-202ENST00000416571 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
MDC1-202ENST00000416571 KRTAP4-7Q9BYR0 210 aa3.7□□□□□ -1.82
MDC1-202ENST00000416571 CHKB-CPT1BH3BT56 60 aa3.68□□□□□ -1.82
MDC1-202ENST00000416571 Q1T7F1 81 aa3.68□□□□□ -1.82
MDC1-202ENST00000416571 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
MDC1-202ENST00000416571 MT1GP13640 62 aa3.66□□□□□ -1.82
MDC1-202ENST00000416571 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
MDC1-202ENST00000416571 A0A0D9SG42 100 aa3.62□□□□□ -1.83
MDC1-202ENST00000416571 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
MDC1-202ENST00000416571 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
MDC1-202ENST00000416571 SNURFQ9Y675 71 aa3.6□□□□□ -1.83
MDC1-202ENST00000416571 PSPHP1O15172 72 aa3.59□□□□□ -1.83
MDC1-202ENST00000416571 MT1MQ8N339 61 aa3.59□□□□□ -1.83
MDC1-202ENST00000416571 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
MDC1-202ENST00000416571 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
MDC1-202ENST00000416571 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
MDC1-202ENST00000416571 MT1LQ93083 61 aa3.53□□□□□ -1.84
MDC1-202ENST00000416571 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
MDC1-202ENST00000416571 SPINT4Q6UDR6 99 aa3.51□□□□□ -1.85
MDC1-202ENST00000416571 CDC42SE1Q9NRR8 79 aa3.51□□□□□ -1.85
MDC1-202ENST00000416571 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
MDC1-202ENST00000416571 A6NED7 52 aa3.5□□□□□ -1.85
MDC1-202ENST00000416571 A8MU10 97 aa3.5□□□□□ -1.85
MDC1-202ENST00000416571 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
MDC1-202ENST00000416571 PRR15LQ9BU68 103 aa3.46□□□□□ -1.86
MDC1-202ENST00000416571 SPATA8Q6RVD6 105 aa3.45□□□□□ -1.86
MDC1-202ENST00000416571 SPANXA2-OT1Q8N9U9 137 aa3.43□□□□□ -1.86
MDC1-202ENST00000416571 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
MDC1-202ENST00000416571 KRTAP12-1P59990 96 aa3.41□□□□□ -1.86
MDC1-202ENST00000416571 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
MDC1-202ENST00000416571 A0A1B0GU33 70 aa3.39□□□□□ -1.87
MDC1-202ENST00000416571 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
MDC1-202ENST00000416571 COA5Q86WW8 74 aa3.37□□□□□ -1.87
MDC1-202ENST00000416571 TNP1P09430 55 aa3.36□□□□□ -1.87
MDC1-202ENST00000416571 ROMO1P60602 79 aa3.36□□□□□ -1.87
MDC1-202ENST00000416571 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
MDC1-202ENST00000416571 LINC01558Q9Y6Z2 57 aa3.32□□□□□ -1.88
MDC1-202ENST00000416571 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
MDC1-202ENST00000416571 MIR22HGQ0VDD5 57 aa3.31□□□□□ -1.88
MDC1-202ENST00000416571 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
MDC1-202ENST00000416571 K7ERS5 55 aa3.28□□□□□ -1.88
MDC1-202ENST00000416571 KRTAP12-3P60328 96 aa3.28□□□□□ -1.88
MDC1-202ENST00000416571 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
MDC1-202ENST00000416571 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
MDC1-202ENST00000416571 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
MDC1-202ENST00000416571 A0A1B0GU69 56 aa3.23□□□□□ -1.89
MDC1-202ENST00000416571 KRTAP25-1Q3LHN0 102 aa3.2□□□□□ -1.9
MDC1-202ENST00000416571 UQCR11O14957 56 aa3.16□□□□□ -1.9
MDC1-202ENST00000416571 MT3P25713 68 aa3.06□□□□□ -1.92
MDC1-202ENST00000416571 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
MDC1-202ENST00000416571 MT1AP04731 61 aa3.01□□□□□ -1.93
MDC1-202ENST00000416571 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
MDC1-202ENST00000416571 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
MDC1-202ENST00000416571 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
MDC1-202ENST00000416571 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
MDC1-202ENST00000416571 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
MDC1-202ENST00000416571 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
MDC1-202ENST00000416571 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
MDC1-202ENST00000416571 INE1O15225 51 aa2.63□□□□□ -1.99
MDC1-202ENST00000416571 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
MDC1-202ENST00000416571 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
MDC1-202ENST00000416571 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
MDC1-202ENST00000416571 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
MDC1-202ENST00000416571 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
MDC1-202ENST00000416571 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
MDC1-202ENST00000416571 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
MDC1-202ENST00000416571 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
MDC1-202ENST00000416571 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
MDC1-202ENST00000416571 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
MDC1-202ENST00000416571 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
MDC1-202ENST00000416571 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
MDC1-202ENST00000416571 PRM1P04553 51 aa1.55□□□□□ -2.16
MDC1-202ENST00000416571 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms